Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2307 ATGAGCGTGCGGTACCAGTACTACCCTTTCCCTGCGTTGGCGTATGGTTGCCGCTACTGCTATGCAAATGCGACAAAACCCACTCCCTCACTCTCTCTAACCTTCTCGAAGCACCGTCGCGTTCCTCTGTCACCGCCTcactcttccaccttctccatcatcaccaatctcttcttcttccaaaACCCTAATTTCCTCACGGGGAACACTCTCTTCCTTAGGATGCAgTGCACTCTTACcaagaggagaaagaaaagagaaatggaagaaaacCAATCACGATTCTGCTCTGTGAGTGGCATGAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAGCGGTATGGAATAATCACATCAAGTAAGGTGGCTGAAGTAATGGTGACAGTTGATAGAGCCTTGTTTGTACCTGATGGAGCTGCACCTTATGATGATAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCACCGCATATGCATGCCATGTGTCTTCAGTTGCTGGAGGAGAATTTGCGGCCTGGGATGCATGCGTTGGACGTTGGCTCCGGAACGGGGTACTTGACTGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTACACTACTGAAGGATGGTTCCCTTTCTGTTCATGCTGGAGATGGAAGGCAAGGTTGGCCAGAGTTTGCCCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTTCAAGATTTAAAGATAGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGCACTGAGACATCCGTTCGCTATGTGCCCCTCACTAGTCGAGAAGCTCAACTGCGAGGTTACTAA 966 0.4472 MSVRYQYYPFPALAYGCRYCYANATKPTPSLSLTFSKHRRVPLSPPHSSTFSIITNLFFFQNPNFLTGNTLFLRMQCTLTKRRKKREMEENQSRFCSVSGMSKNKAMVERLQRYGIITSSKVAEVMVTVDRALFVPDGAAPYDDSPMAIGYNATISAPHMHAMCLQLLEENLRPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSFSIENIQKSAAATLLKDGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKIVDKNSDGSISVRTETSVRYVPLTSREAQLRGY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2307 321 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 321 - -
Ssu1g2307 321 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 102 317 IPR000682 GO:0004719|GO:0036211
Ssu1g2307 321 Gene3D Vaccinia Virus protein VP39 98 321 IPR029063 -
Ssu1g2307 321 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 103 315 - -
Ssu1g2307 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 287 IPR029063 -
Ssu1g2307 321 CDD AdoMet_MTases 179 280 - -
Ssu1g2307 321 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Ssu1g2307 321 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 321 IPR000682 GO:0004719|GO:0036211
Ssu1g2307 321 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 238 253 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2307 Ssu-Chr1 65019117 65021390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2307 K00573 - gmx:100810913 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2307 1 65019117 65021390 Ssu1g2307 1 65019117 65021390 ECH
Ssu6g1454 6 23846681 23848774 Ssu1g2307 1 65019117 65021390 PCT