Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2285 ATGGACTTGGACTTCAGGGCTTCCGCTATTCATTCCACCAATCACTTCTCTTCTCTCCAACGCCTTCACTCTGAAAATTATTCAGTGTTCAGTTACACAGATGAGGATGATGATGCTCGATCTCTTCTTCGATGTCCTTTCTGTGATTTTGAGATTGAATTTTCTTCGGTTCGTACCCGTTTGGAAGAGGTGCATCGCTATGACCCAAAAAATATGTTTTGTCCTGTGTGTGACGAAAAATTAGGGGAGGATGTAATCAGGGTTGCACAGAATTCAAGCTCAGAAAAGAGAACTTGGAAGTCTGACAAATCTAGCATCTCATCGGGTGATTCAGTAGTGCTTGACAAGAAACTTCCTGCCAGGGGAAGCAAACATGAACCAGTGCCTGATCCACTTTTGTCACCATTTATCCATGTGTCTGTTCCAAACTCCAGTGGTATCCATCCTGGTGGAGGTTCCGCCAGCAATGCCTCAGACATTTCCAATGCAAAAGGCTCTGGGACAGATGCACCCCCGGATTCAGGTGATGAGGAGGATATTAAAGAGAGAAGGCTGAGGGCATCTTTTGTTCAAGAGTTGGTATTATCAACTTTAATCTAG 600 0.4433 MDLDFRASAIHSTNHFSSLQRLHSENYSVFSYTDEDDDARSLLRCPFCDFEIEFSSVRTRLEEVHRYDPKNMFCPVCDEKLGEDVIRVAQNSSSEKRTWKSDKSSISSGDSVVLDKKLPARGSKHEPVPDPLLSPFIHVSVPNSSGIHPGGGSASNASDISNAKGSGTDAPPDSGDEEDIKERRLRASFVQELVLSTLI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2285 199 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 5 1 199 - -
Ssu1g2285 199 MobiDBLite consensus disorder prediction 91 111 - -
Ssu1g2285 199 Pfam Stress-induced protein Di19, C-terminal 126 198 IPR027935 -
Ssu1g2285 199 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 199 IPR033347 -
Ssu1g2285 199 MobiDBLite consensus disorder prediction 144 168 - -
Ssu1g2285 199 Pfam Drought induced 19 protein (Di19), zinc-binding 44 86 IPR008598 -
Ssu1g2285 199 MobiDBLite consensus disorder prediction 144 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2285 Ssu-Chr1 64586817 64591151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2285 - - gmx:100812715 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1436 6 23492104 23496980 Ssu1g2285 1 64586817 64591151 PCT