Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2233 atggcTGGCTCTGTGGAAAAGGAACAACAACAAGTTCTTGGAATTATCGAAGAAGAGAAATTACAGAAGCAGGAGAGTGAGgggaacaacaacaacaacagcaaaaCACGCACGCAATTGGAGAGTAGTGGTGAAGGGGAACGAGACATGGTTTCTGCGGCGGGCAATTCGATCCACAGGTCGGGTTCGAGGCCTCAACTTGATGTAAGCAAAGCTGAGATTCAGGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTAGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAACCGATGATAAAAGGAAGAGAAGTGTGAAGGAACGTCTGGGGCTTTCTAATGGTAACAGGAGAAGCTACCCTATTCTTGGGGGAAGGCTTCACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGGTGTGAATGGCCAGAATAGCATAATTAAGGCTACTGGAGGTGGAGCATACAAGTATGCTGACCTTTTTAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCTAATTTCTTGCTTAAGGCAATTCGACATGAAGCTTTCACACACATGGAGGGCCGGAAAGAGTTTGTTCAAATTGACCCTAATGATTTATTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGCGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAACTATGGACATGCTAGTTGGGGACATTTACGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCATCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAGCTTGAGGACTACAGACCTGAAGATATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAATGCATTGCGATTTCGGTTGAAGCGGATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGgtCTAATGGGGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGCTATGAGAAGCATGGTTTAGATGACCTCATGGTTCATCAGTTGGTTGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCACGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAAAAGGGAACTGAGATTACTGCACCTGTGCCAACAACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAGGTACTTTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACATTGGATGTGTTTCCATTATTAGCAGACCCAAAATTGTATGAGCCCAATACGATTGATCTCTCAGATCACAGTGAATTAGAATATTGGTTCACTATTTTATCAGAGCACTTACCAGATCTTGTGGACAAGgCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGACGCTTTTGCTCGTGCATTTTCAGCCCACTTGGCAAGGTTGATGGCGGAGCCTTCTGCATATGGGAAGTTAGGCCTTGCCAATCTCTTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAATTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTTTTACCTGACTTGCTAGTGGAACTTGATAGTATGGATGAGGAAACAAGGCTGCTTACTCTAATTGAAGGTGTTCTTGCAGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAActattattgaaatttacagAATGAGTCGCAATAAAATGCGGAGACCTTGGCGGGTGGatgattttgatgtttttaaagaaacaatGTTAGGGACCAGGGACAAGAAAATGCCCCGTCATAAGAGGGCTTTACTTTTTGTAGATAACTCTGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCAAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCACTTCCTGCTTTAAATGATGTGACTGCAATGGAGCTTCCTGATATTGTGGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCGAGCCGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAGACAGCACTAAAGAAAATTCATCTTCGGTCCCCTTGATGGGTGTTGAGAACGGGTGTGGAAGTCCATGTATAGACTTGAGACAGGTCAGCTCTGAGCTAGCTGCTGCCGCAAAAGATGCTGATCTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACTAACCTCAATGCTCGGTTTAAGTGTGATGCTTTAAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAAAAATTGATTAAAGGGAACATATATGACTGTATTTGCAAATACGAGCCTGCTAGTTGA 2754 0.4234 MAGSVEKEQQQVLGIIEEEKLQKQESEGNNNNNSKTRTQLESSGEGERDMVSAAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSTDDKRKRSVKERLGLSNGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESRYSDGVNGQNSIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGRKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPTTPLAGTTGLGGFEVPLSKGGTLRSDASALNVGVLHLVPTLDVFPLLADPKLYEPNTIDLSDHSELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMAEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKETMLGTRDKKMPRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTSDSTKENSSSVPLMGVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYEPAS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2233 917 Pfam Fumble 96 438 IPR004567 GO:0004594|GO:0005524|GO:0015937
Ssu1g2233 917 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 719 915 - -
Ssu1g2233 917 Gene3D - 554 639 IPR035073 -
Ssu1g2233 917 PANTHER PANTOTHENATE KINASE 2 43 839 - -
Ssu1g2233 917 SUPERFAMILY AF1104-like 534 915 IPR036075 -
Ssu1g2233 917 SUPERFAMILY Actin-like ATPase domain 207 440 IPR043129 -
Ssu1g2233 917 PIRSF PanK_long 50 917 IPR015844 GO:0004594|GO:0015937
Ssu1g2233 917 Pfam Damage-control phosphatase ARMT1-like domain 624 903 IPR002791 -
Ssu1g2233 917 Gene3D - 317 429 - -
Ssu1g2233 917 PANTHER PANTOTHENATE KINASE 43 839 IPR004567 GO:0004594|GO:0005524|GO:0015937
Ssu1g2233 917 MobiDBLite consensus disorder prediction 1 49 - -
Ssu1g2233 917 MobiDBLite consensus disorder prediction 26 40 - -
Ssu1g2233 917 TIGRFAM panK_eukar: pantothenate kinase 96 439 IPR004567 GO:0004594|GO:0005524|GO:0015937
Ssu1g2233 917 Gene3D - 88 247 - -
Ssu1g2233 917 SUPERFAMILY Actin-like ATPase domain 95 235 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2233 Ssu-Chr1 63410150 63429888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2233 K24265 - gmx:100781580 1667.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2233 1 63410150 63429888 Ssu6g1376 6 22651796 22664310 ECH
Ssu1g2233 1 63410150 63429888 Ssu1g2233 1 63410150 63429888 ECH
Ssu6g1376 6 22651796 22664310 Ssu1g2233 1 63410150 63429888 PCT