Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2198 ATGGGAAATTGCCAAGCCATCGATGCAGCAACACTAGTGATACAGCACCCAAATGGGAAAGTAGAGAAATTTTATGCACCTGTGAGTGCCAGTCATGTTATGAAAACCAACTCTGGTCACTATGTTGCTCTTCTCATCTCCACCACATTGTGTCCAACCAAGGACATTGAAAATTGCCCCAATAAGAGTGACAACAACACCAACCCAGTTCGCCTAACTCGTATCAAGCTTCTTAAGCCCACTGACACCCTTGTTCTTGGCCAAGTTTATAGACTCATCACCACTCAAGAGGTCATGAAAGGCCTAAGGGAAAAGCAAAAGGCAAAGATGAAGCAAAACGTGTCAGAGTCGGCTCACAAGCCAGATTTAGTGAGGGAAAAAATGGGGTTGGAGAAGGAGAAACTGGCAAGGAGGTCTGACATGGAGGACAAGGTAACCAAACCCGAAAGAGCTCGACCAAGGATAACAGCACCAACTAATAATGCCGCCGGTGCCACAGCTAAGACGAGATTTTGGCAACCTTCTTTACAAAGTATCTCAGAGGCTGCCAGCTGA 555 0.4631 MGNCQAIDAATLVIQHPNGKVEKFYAPVSASHVMKTNSGHYVALLISTTLCPTKDIENCPNKSDNNTNPVRLTRIKLLKPTDTLVLGQVYRLITTQEVMKGLREKQKAKMKQNVSESAHKPDLVREKMGLEKEKLARRSDMEDKVTKPERARPRITAPTNNAAGATAKTRFWQPSLQSISEAAS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2198 184 MobiDBLite consensus disorder prediction 159 184 - -
Ssu1g2198 184 MobiDBLite consensus disorder prediction 106 184 - -
Ssu1g2198 184 PANTHER EXPRESSED PROTEIN 1 184 - -
Ssu1g2198 184 Pfam PADRE domain 1 181 IPR025322 -
Ssu1g2198 184 MobiDBLite consensus disorder prediction 106 151 - -
Ssu1g2198 184 PANTHER DUF4228 DOMAIN PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2198 Ssu-Chr1 62470518 62471681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2198 - - gmx:100813476 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2198 1 62470518 62471681 Ssu1g2198 1 62470518 62471681 ECH
Ssu6g1339 6 21913990 21915126 Ssu1g2198 1 62470518 62471681 PCT