Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2164 atgaAGGGCGTTCTTTCCATCAGCTTCTTGTTTTGTTGCTTGCTGCTGCTTTTGGATTCTTCAATTTCACTTCCTCTATGCGTTGATTCGAGGGCACCCTTTACCCTGAACACGACACTTGGATTCTGTCCTTACAATGGAAGCACGTGTTGCAACTCCACAGAAGATGCACAGATAGAAAAGCAATTCCGAATGAGCAACGTATCTGATCCTAGCTGTGCGTCAGTTTTGAAATCAATACTTTGTGCGAGGTGCGACCCATTTTCAGCAGAGCTATTTACAGTTCAATCCTCACCTAGATCAGTTCCTGTGCTTTGCAATTCAACCATACCAGCAAATTCTTCTCAGTCAAAGACAACAGTGGAAGACTTCTGCACTCAAGTATGGAACAGATGCAAAGATGTATCCATAGTGAATTCTCCATTTGCCCCTTCATTGCAAGGTCAAGCAGGAGCACCAGTTCACACCAATGCTTCCAAACTCACTGATTTATGGCAGTCCAAAACAGACTTTTGCACTGCATTTGGTGGAGCATCTGACAATTCATCAGTGTGCTTTGAAGGGGAACCTGTTTCACTAAATAAAACTGAGACCTCTATCAGCCCCCCTCGCGGCTTGTGCCTTGAGAAAATTGGTAATGGATCTTATCTCAACATGGTGGCTCACCCCGATGGCTCTAACCGTGCATTCTTCTCTAACCAAATGGGTAAGGTTTGGCTGGCAAAACTTCCGGATGAGGGATCAGGAGGAGCATTGGAGCTTGATGAACCAAGCCCTTTTGTTGATCTAACtgatcaagtttattttgatacTCAATTTGGAATGATGGGTATGGCATTTCATCCAAATTTTGCACAAAATGGGCGATTCTTTGCTTCATTTAACTGTGATAAATCCAAGTGGTCAGGATGTACTGGAAGATGTTCTTGCAATTCAGATGTTAACTGTGATCCATCAAAGATAGGTACTGATCAAGGTGCCCAACCATGCCAATATCAAACCGTTATTGCAGAGTATTCTGCCAATAGCACTGCATCTCAGCCTTCCTCGGTGGAAAGTGCTAAACCATCTGAGGTGAGAAGAATATTTACCATGGGGCTCCCATTTACATCTCAACATGGAGGTCAGATACTCTTTGGACCAGATGATGGGTATTTATACCTTATGACGGGATATGGAGGAGGTACAGGTGATCCTTACAATTTTGCACAAAACAAGAAATCCTTGCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAGCAGAAATTAGCAAACTTGGTCTTTGGGGTAACTACTCCATTCCAAAGGACAATCCATTTAGCGAAGATAAAGATCTGCAGCCTGAAATATGGGCCTTGGGACTAAGGAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGACCTTCCTACTTTTTGTGTGCAGATGTTGGACAGgATGTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTATGGCTGGCGTGTTTACGAGGGCCCCTATCTGTTCCACCCTCCACAATCACCTGGAGGAAATACTTCCATAAATTCCATAAATCCAATTTTCCCAATACTGGGATACAACCATTCAGAACTAAACAAGAATGAAGGATCAGCATCTATCACTGGAGGATATGTGTATCGATCTACCACTGATCCTTGCATGTATGGAAGGTACTTGTATGGAGATCTGTACGCGGGTGCAATATGGGCAGCCACAGAGGACCCACAAAATAGTGGAAATTTCAGCACCAGCAAAATTCCCTTCAGTTGTGCACGTGATTCTCCTATACATTGTGACTCTGCACCTGGAAACTCTCTTCCTGCTTTAGGCTACATCTTCTCATTTGGCGAAGACAACAAGAAAGACGTTTACGTCCTTACAAGCAGTGGCGTTTACCGAGTTGTTCGTCCAAGTCGCTGCAGTTATGCTTGCTCGCAGGAAAAGGCAACAACTACTACAACCTCaactccttctccttctccttctcatGCTACCCGTTGGAGTGTCCTTTCGGGCTATCTGTTTTTGCAGTGTTCAACTTTCTTGCTGCTTTTGCTGGGTTTTATGTAG 2088 0.431 MKGVLSISFLFCCLLLLLDSSISLPLCVDSRAPFTLNTTLGFCPYNGSTCCNSTEDAQIEKQFRMSNVSDPSCASVLKSILCARCDPFSAELFTVQSSPRSVPVLCNSTIPANSSQSKTTVEDFCTQVWNRCKDVSIVNSPFAPSLQGQAGAPVHTNASKLTDLWQSKTDFCTAFGGASDNSSVCFEGEPVSLNKTETSISPPRGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKVWLAKLPDEGSGGALELDEPSPFVDLTDQVYFDTQFGMMGMAFHPNFAQNGRFFASFNCDKSKWSGCTGRCSCNSDVNCDPSKIGTDQGAQPCQYQTVIAEYSANSTASQPSSVESAKPSEVRRIFTMGLPFTSQHGGQILFGPDDGYLYLMTGYGGGTGDPYNFAQNKKSLLGKIMRLDIDNIPSAAEISKLGLWGNYSIPKDNPFSEDKDLQPEIWALGLRNPWRCSFDAERPSYFLCADVGQDVYEEVDLITKGGNYGWRVYEGPYLFHPPQSPGGNTSINSINPIFPILGYNHSELNKNEGSASITGGYVYRSTTDPCMYGRYLYGDLYAGAIWAATEDPQNSGNFSTSKIPFSCARDSPIHCDSAPGNSLPALGYIFSFGEDNKKDVYVLTSSGVYRVVRPSRCSYACSQEKATTTTTSTPSPSPSHATRWSVLSGYLFLQCSTFLLLLLGFM 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2164 695 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 205 577 IPR011041 -
Ssu1g2164 695 Pfam Glucose / Sorbosone dehydrogenase 222 503 IPR012938 -
Ssu1g2164 695 Gene3D - 212 642 IPR011042 -
Ssu1g2164 695 PANTHER HEDGEHOG-INTERACTING PROTEIN 1 691 - -
Ssu1g2164 695 PANTHER HIPL1 PROTEIN-LIKE 1 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2164 Ssu-Chr1 61601561 61605603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2164 - - gmx:100778890 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2164 1 61601561 61605603 Ssu1g2164 1 61601561 61605603 ECH
Ssu6g1308 6 21362598 21365379 Ssu1g2164 1 61601561 61605603 PCT