Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2124 ATGGGAGCTGGAAGTTTCCTCAAGGTGgttctaaaaaattttgatgTTCTTGCTggGCCTGTGCTTAGTCTTGCGTATCCTCTATATGCCTCGGTTAGGGCAATTGAGAGCAAGTCTCCTGTTGATGACCAGCAATGGCTCACTTATTGGGTTCTGTATTCCTTGATCACCCTCATTGAACTTACTTTTGCCAAAGTTCTTGAATGGATTCCTATCTGGCCATATGCAAAGCTGATCCTTACCTGCTGGTTGGTCATTCCTTACTTCAGTGGCGCGGCCTTTGTTTATGAGCACTATGTTAGACCGTTCTTTGTCAATCCTCAGAACATTAACATCTGGTATGTTCCAAGCAAAAAGGACTCCATGGGAAAGCCAGAGGACATTCTAACTGCCGCGGAGAAGTACATTGAAGAGCATGGAACTGAAGCATTTGAGAATATGATTAGCAAGGCTGGTAAATCTAGGAAAAGTGGCAGGCATGCAAATGGAAGCTATTGA 498 0.4277 MGAGSFLKVVLKNFDVLAGPVLSLAYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLIELTFAKVLEWIPIWPYAKLILTCWLVIPYFSGAAFVYEHYVRPFFVNPQNINIWYVPSKKDSMGKPEDILTAAEKYIEEHGTEAFENMISKAGKSRKSGRHANGSY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2124 165 PANTHER HVA22-LIKE PROTEIN 1 159 - -
Ssu1g2124 165 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Ssu1g2124 165 PANTHER HVA22-LIKE PROTEINS 1 159 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2124 Ssu-Chr1 60529375 60531715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2124 K17279 - gmx:100811647 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2124 1 60529375 60531715 Ssu6g1275 6 20707726 20709402 ECH
Ssu1g2124 1 60529375 60531715 Ssu1g2124 1 60529375 60531715 ECH