Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2105 ATGGCAGAAGAGGCAGCACCGGAAGTCGTCGATCCCAACACCACCGTCGCCGCCGCCGCCGTAGACATGGACGTCGAAAACGTCGAGTCCGGCGACAGCGGCGCCGAGCCAAACCAGAAGCGTGCAAGGGAGGAAGAGGAGCCCCAGGACGACGACGTTTCGAAGAAGCAGAAGGTGGACGAGGAAAAGTCCGTAGAAGAACAACGGTTGGAGAAGGTCGACGAACAGGgagaaaaagaagcaaaagaagaagaaaaagaaaatgaagcaaaagcagaagaagaaaaagaagcagaagcagaaaaaggagaagagaaggaaGCAACTGATACCGTGAACTTGGGATACAAGAGGTTCGGTTCTTCCTTGGAGATGTTCAATTACTTCTACAACTTTCTTCATACCTGGCCTCAATATCTGAATGTTAACAAGTATGAACATCTGATGTTGTTGGAATTGCTTAAGAATGGCCATGCGGAGCCTAACAAAAAGATTGGTGGAGGGGTTCGTGCTTTCCAAGTGCGCAAGCATCCTACCTTCAAAAGTAGGTGCTTTTTCCTCGTCAGGGAGGATGACTCTGTTGATGATTTTAGCTTCAGGAAGTGTGTGGATCATATTCTTCCCTTGCCAGAAGAGATGCATTTGAAATCTGATGCGAACAAGGCAttgggtggtggtggtggagggaAGCATCATGGAGGAAAGGGTGGCAGAGGGAGGGGTGGAAGAGGAGGTGGGCGTGGTGGTCACGGGAGAGGAGGAAAGTGGAGACATTAA 777 0.4376 MAEEAAPEVVDPNTTVAAAAVDMDVENVESGDSGAEPNQKRAREEEEPQDDDVSKKQKVDEEKSVEEQRLEKVDEQGEKEAKEEEKENEAKAEEEKEAEAEKGEEKEATDTVNLGYKRFGSSLEMFNYFYNFLHTWPQYLNVNKYEHLMLLELLKNGHAEPNKKIGGGVRAFQVRKHPTFKSRCFFLVREDDSVDDFSFRKCVDHILPLPEEMHLKSDANKALGGGGGGKHHGGKGGRGRGGRGGGRGGHGRGGKWRH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2105 258 Coils Coil 56 111 - -
Ssu1g2105 258 MobiDBLite consensus disorder prediction 218 258 - -
Ssu1g2105 258 PANTHER PROTEIN EMBRYO DEFECTIVE 514 13 240 - -
Ssu1g2105 258 Pfam Protein of unknown function (DUF3223) 132 203 - -
Ssu1g2105 258 Gene3D - 108 206 - -
Ssu1g2105 258 PANTHER - 13 240 IPR044673 -
Ssu1g2105 258 MobiDBLite consensus disorder prediction 36 109 - -
Ssu1g2105 258 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2105 Ssu-Chr1 59995016 59997114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2105 - - gmx:100804514 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2105 1 59995016 59997114 Ssu1g2105 1 59995016 59997114 ECH
Ssu6g1205 6 19612103 19618492 Ssu1g2105 1 59995016 59997114 PCT