Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1772 ATGCCATGCTTCACGCCACACCcctctcttcttctctttctctctcttctcctctctctctccttcttctctctctccaccGCCACAAGAACCTCTTCTTTCCATTCCTTACGTATTccagatGGTGTTGAGGTTGGTGGTGAGAGAGAGTACCAGAGGGTGCTACCGTGGAAAACGAGGAGATCGATGGCTGAAGACGCCTCGGGCAACACGTCTCTGATATTGGCTCAGAAAAGAACCACAAGGAAGGACCCTCTTGATAGCTTTAACCGTTACACCGGTGGTTGGAATATCAGCAATCGCCACTACATTGCTTCAGTTATTTTCACTGCGGTTcccttttttgttgttgctgcGGTCTGGTTTGTGGTTTTTGGACTCACTTTATCCTTAATCTGCTTGTGTTACTGCTGTTGTCCAAGAGAGCCTTATGGTTATTCTCGTTTGGCGTATGCTTTGTCCTTGATCTTCCTCATTCTTTTCACCCTTGCAGCAAtTGTTGGATGCGCTCTTCTTTACACTGCTCAGGGGAAGTTTCATGGGAGCACCACAGACACTCTGGAATACGTGGTGAGTCAGGCTGACTTCACTGCTGAAAACCTCAGGAATGTGTCAGATTATCTTGATGAAGCTAAGAAGATCGGAGTCGATGCAGTTTTTCTGCCAGCCGATGTTCAGAAGAACATCGATGAAGTCAAGACGAAGATTAATTCTTCTGCTGCGGCTCTTTCCAGCAAGACTGAAGATAATTCAGAGAAAATTAAAGAAGGCTTAGATGGAATGAGGCTGGCTCtggttgttgttgctgctgttATGCTCTTTCTTGCATTTCTTGGATTctTATTTTCAATATTTGGGCTGCAAGGTCTTGTGTATTtCTTGGTCCTTGTCGGATGGATTCTTGTTGCTGGCACATTTATACTTTGTGGtgtatttctctttcttcacaATGTGGTTGGAGATACATGTGTTGCCATGGATGAGTGGGTGCAGAACCCTACTGCACATACAGCCTTGGATGAAATTCTTCCGTGTGTGGATAATGCAACTGCCCAGGAAACCTTACTACGAACCAGGGATGTGACACACCAACTTGTTAAATTAGTTGACAACATCATTTCCAATGTCACAAATAGAAATTTCCCACCTGCTGCTGGACCCTTGTATTACAATCAATCAGGCCCCTTCATGCCTCTTCTGTGCAATCCATTTAACCCTGACCTCACTAGTCGGACATGTGCATCTGGGGAAGTTCCGGTGGACAATGCTGCAGAGGTGTGGAAGAACTATACTTGTGAGGTTTCCTCATCAGGCATTTGTAAGACGCCTGGTCGGATGACCCCGACCATTTACGGCCAAATGGCAGCTGCGGTGAATATAAGCTATGGCTTATATCATTATGGTCCATTCTTGGTTGATTTACAAGACTGCACTTTTGTGCGGAAAACATTCACAGACATCAGCAACAATTACTGTCCCGGTCTGCAGACAAATAGTCAATTGATTTATATTGGATTAGTTTTGGTATCTGCTGCAGTAATGCTTTCTTTGATCTTCTGGGTCATCTATGCTAGAGAGCGGCGGCACCGTGTTTATACTAAACAGTTCATTGACGGCTGA 1620 0.4154 MPCFTPHPSLLLFLSLLLSLSFFSLSTATRTSSFHSLRIPDGVEVGGEREYQRVLPWKTRRSMAEDASGNTSLILAQKRTTRKDPLDSFNRYTGGWNISNRHYIASVIFTAVPFFVVAAVWFVVFGLTLSLICLCYCCCPREPYGYSRLAYALSLIFLILFTLAAIVGCALLYTAQGKFHGSTTDTLEYVVSQADFTAENLRNVSDYLDEAKKIGVDAVFLPADVQKNIDEVKTKINSSAAALSSKTEDNSEKIKEGLDGMRLALVVVAAVMLFLAFLGFLFSIFGLQGLVYFLVLVGWILVAGTFILCGVFLFLHNVVGDTCVAMDEWVQNPTAHTALDEILPCVDNATAQETLLRTRDVTHQLVKLVDNIISNVTNRNFPPAAGPLYYNQSGPFMPLLCNPFNPDLTSRTCASGEVPVDNAAEVWKNYTCEVSSSGICKTPGRMTPTIYGQMAAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDISNNYCPGLQTNSQLIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1772 539 PANTHER TRANSMEMBRANE PROTEIN 16 535 - -
Ssu1g1772 539 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 16 535 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1772 Ssu-Chr1 44108914 44122869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1772 - - gsj:114387485 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0936 6 15118578 15122048 Ssu1g1772 1 44108914 44122869 PCT