Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1765 ATGGACTGGTTCTCCTGGTTATCCAGGACCAGCCTAGAGCCCTCCCTCATCTACGAGTACGGCCTCGCCTTCGCGCGCAACGAGCTTCAGTTGGAAGACGCCATCTACTTCAACCACGAGTTTCTTCAGAGCATGGGCATCTCCATCGCGAAACACAGGCTGGAGATCCTCAAGCTGGCCAGGAAGGAAGACGGGGCGGTGAAAAGCAGCAACAGGCTTTCTGGGGTCATCAGGAAGTGCCTCAGGAAGTGCTTCAGCAAGCTGGTTTCTAATCATCAAGAAGTGACGATGGTGAAGGACATGCCCCCAGAGCCAAACTGGTACCAAGGGAAGTGGAGAAGGGCCAGGCACAATGGGGCCGATCAGGAACTCAAGGGGGTGCAGAGAAGCAGGTCCATTGCACTCTCAGGGCCTTTGGATGGGAATGGAAGAACGGTGCATGAGAAGATGGTGAACAACAGCATGGTGATGAAGCTGTCTGGTCCTCTCGATGGGAAGGTGATTGGGAATGAGAGAGTGATGTATGCAAATGCAAATAGAAGTCCCTTGATGAGTGCTACTCCTAGGCCCCTTGATGGAAGGTTCATGGGCACAGCAAAGAGTCCAAGGCTTTCTGGGCCACTTGATGCAAGACCAATGGTTAATAGTAGAAGTCCAAGACTACCTAGGCCTTTGATGAAAGATCCGAGAGCCCATTGGGTTACAGCCCCTACAATAAGGTCAGAGCTGATGCTGACTATGATGATGATTATGCATCGTGGCCTACATTGTTTGAGGACCTTAAACCAACTTAGATTATTTTGCGTTTGTTTTCTCTTGGCTTATGTTACATTTTGA 837 0.5042 MDWFSWLSRTSLEPSLIYEYGLAFARNELQLEDAIYFNHEFLQSMGISIAKHRLEILKLARKEDGAVKSSNRLSGVIRKCLRKCFSKLVSNHQEVTMVKDMPPEPNWYQGKWRRARHNGADQELKGVQRSRSIALSGPLDGNGRTVHEKMVNNSMVMKLSGPLDGKVIGNERVMYANANRSPLMSATPRPLDGRFMGTAKSPRLSGPLDARPMVNSRSPRLPRPLMKDPRAHWVTAPTIRSELMLTMMMIMHRGLHCLRTLNQLRLFCVCFLLAYVTF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1765 278 Gene3D - 1 68 IPR013761 -
Ssu1g1765 278 CDD SAM_superfamily 2 62 - -
Ssu1g1765 278 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 215 - -
Ssu1g1765 278 PANTHER OSJNBA0033G05.11 PROTEIN 1 215 - -
Ssu1g1765 278 SUPERFAMILY SAM/Pointed domain 5 61 IPR013761 -
Ssu1g1765 278 MobiDBLite consensus disorder prediction 201 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1765 Ssu-Chr1 43861458 43862294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1765 - - gmx:100805121 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0941 6 15212473 15213336 Ssu1g1765 1 43861458 43862294 PCT