Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1611 ATGCATGTTGGAGGTGTGCCAAATGCTGATAAGAAGATAGCAGTTGTTGGGGGTGCCAAGAATCTCACTGTTCACAGTGTGGTTAGTTGGCTGAACTCGCAGCTTCCAGAGTATCCTGGTTTAAAGGTATTCTTTCGGACCATTTCCCCAAGGCATTTTGTTGGTGGGGATTGGAACACTGGAGGCAGTTGTAATAGCACTACACCAATGTCAGTAGGAAAGGAAATATTGGAAGAGGAATCTGCAGATAAAGTTGTAGCAAATGCAGTGAAGGGAACAAGGGTCAAGATCTTGGACATAACGGCTCTTTCTCAGCTTAGGGATGAAGGTCATAGATCACATTTTAGCATTACGGCCAAGCCTGGTGTGCAGGATTGCTTACACTGGTGTTTGCCTGGCATTCCTGATACATGGAATGAAATACTCTTTGCACAAATCTAG 441 0.4467 MHVGGVPNADKKIAVVGGAKNLTVHSVVSWLNSQLPEYPGLKVFFRTISPRHFVGGDWNTGGSCNSTTPMSVGKEILEEESADKVVANAVKGTRVKILDITALSQLRDEGHRSHFSITAKPGVQDCLHWCLPGIPDTWNEILFAQI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1611 146 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 19 144 IPR026057 GO:0016740
Ssu1g1611 146 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 1 146 - -
Ssu1g1611 146 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1611 Ssu-Chr1 38227183 38227623 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1611 - - vra:106759990 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0580 6 9007203 9011614 Ssu1g1611 1 38227183 38227623 PCT