Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1577 ATGCTGTTGCCTATGGTTATGGTTTTGGCACTGTTGCTGTTTTTGCCGCAGGGTGAGGTCGCGATCGTCGTTGGTGCTGTGGTTTTCATGACGTGGTCTGCCAAAGCCTGCACTGAGCTCCTGGGACAGGTGGTGCGGTGGGATGAACACATGCAATTCTCCCTTGAGTATACTTTAGCAGTTCTTGAAATGAAGGCTGATTCAAATATGACACTGGGAAGCTGCCACGTCAGATACAGGCAAATATGCCGAAAATTTGCACCTCTCATTCCACTTCTGCCTCCACCACCATTTCTCTCAAAACACGTTAACATATCCAACGCATTTCCTCACTCTTCACAGAAGCTTCAAGCGAGTAAACAAACAACTAGCAGGAAAGAAAGAAACTACAGAGAAGACATGGCTTCCACTTCTGCAGTTTCAATGGCCATGCCACTAACTTATGCCAGCCAGAAGAGGGTGGTGCCTAGCTCAGAGGCATTCTTCAAGCCACTGCCTCTACGGTCTTCAAAGGCAGTGGCAGCATCGAAACCCAATGGAAGGTTTCAAGTGAGGGCCTCCATGAAGGAGAAAGTTGTGACTGGGCTCACAGCAGCTGATTGA 603 0.4859 MLLPMVMVLALLLFLPQGEVAIVVGAVVFMTWSAKACTELLGQVVRWDEHMQFSLEYTLAVLEMKADSNMTLGSCHVRYRQICRKFAPLIPLLPPPPFLSKHVNISNAFPHSSQKLQASKQTTSRKERNYREDMASTSAVSMAMPLTYASQKRVVPSSEAFFKPLPLRSSKAVAASKPNGRFQVRASMKEKVVTGLTAAD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1577 200 MobiDBLite consensus disorder prediction 112 131 - -
Ssu1g1577 200 PANTHER EXPRESSED PROTEIN 134 199 - -
Ssu1g1577 200 PANTHER OS07G0673550 PROTEIN 134 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1577 Ssu-Chr1 37320591 37325118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1577 - - gmx:100306291 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1577 1 37320591 37325118 Ssu1g1577 1 37320591 37325118 ECH
Ssu6g0606 6 9586730 9587092 Ssu1g1577 1 37320591 37325118 PCT