Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1485 ATGGTAAAGatggaagagaagaaagagagaaaaattgtgCTTACGAAGCCAATGACAGTAGAAAGGGAATCTGATTCAGACGCGGCTTATAAGGCCCCGAATCTTTTGCAACGCATACTGAGTTTATTCAAGAATGTACGCCCAGGATCTGATCTCACACGCTTCCAGCTGCCACCTCTGTTCAACTTACCAAAGTCACAACTTCAGTGCTATGGCGAATCAGTGTATTGCACAGCTTCAGACTTGCTAAGCATGTGCAACAGTGGCCAGAGTCCATTGGATAGGTTCATATCTGTGGTAGCATGGTGCATGTCTACCACCCGCCCAGTGACTTTTGGGGTTGCTCCTTATAACCCCATTCTTGGTGAGACACACCATGTTTCAAAGGGAAATCTTAACGTGTTATTGGAGCAGATTTCACATCACCCTCCAGTAACTGCTCTCCACGCAACAGATGAGAAGGAAAACATTGAAATGATATGGTGCCAGCGACCTGATCCAAAGTTTCATGGAACATCAGTAGAAGCTCAAGTACATGGTAAACGGAAACTGAAGCTACTAAATCATGGTGAAACATATGAAATGAATTGTCCTCACCTTTTACTTAGAATTCTTCCTGTTCCTGATGCTGATTGGGCTGGCAAAGTTACTATACGGTGCCTAGAGACAGGCCTAGTAGCTGAGTTATCCTACATATCAAGTCCTTCATTTCTAGGAATTGGGGGGAATCATAGAGTGATCAAAGGGAAGATCCTTGACTCTTCATCATTCAAAGTTCTATATGAAGTTGATGGTCATTGGGATAGGACCGTGAAATTGAAGGATACAAATAATGGGAAAGTAAGAGTGATATATGATGCAAAGGAAGTTTTTTCAGGGCTCGAAGCTCCAATACTCAAGGATAAGGAGAGTGTGTGGCCAACAGAATCAGCCAATGTTTGGGGTGAATTGAGCCAAGCCATTCTGAGCAAAGACTGGGAGAAAGCAAGAGAAGCAAAGCTAAAAGTTGAGGAAGGACAAAGGAAGCtcgtgagagaaagagagtcaAAAGGAGAAACTTGGATTTCTAAGCATTTTGTAGTATCTAACAACAAAGAAGGCTGGCAATGTTCACCTATTCATAAGAGTGTACCAACTGCCCCCATCATAGCCAAATAA 1158 0.4119 MVKMEEKKERKIVLTKPMTVERESDSDAAYKAPNLLQRILSLFKNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCTASDLLSMCNSGQSPLDRFISVVAWCMSTTRPVTFGVAPYNPILGETHHVSKGNLNVLLEQISHHPPVTALHATDEKENIEMIWCQRPDPKFHGTSVEAQVHGKRKLKLLNHGETYEMNCPHLLLRILPVPDADWAGKVTIRCLETGLVAELSYISSPSFLGIGGNHRVIKGKILDSSSFKVLYEVDGHWDRTVKLKDTNNGKVRVIYDAKEVFSGLEAPILKDKESVWPTESANVWGELSQAILSKDWEKAREAKLKVEEGQRKLVRERESKGETWISKHFVVSNNKEGWQCSPIHKSVPTAPIIAK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1485 385 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 383 IPR000648 GO:0008289
Ssu1g1485 385 Gene3D - 121 293 - -
Ssu1g1485 385 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 4 383 - -
Ssu1g1485 385 Pfam Oxysterol-binding protein 42 369 IPR000648 GO:0008289
Ssu1g1485 385 SUPERFAMILY Oxysterol-binding protein-like 37 370 IPR037239 -
Ssu1g1485 385 Gene3D - 306 379 - -
Ssu1g1485 385 ProSitePatterns Oxysterol-binding protein family signature. 137 147 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1485 Ssu-Chr1 34665810 34674748 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1485 K22285 - gmx:100810995 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1485 1 34665810 34674748 Ssu1g1485 1 34665810 34674748 ECH
Ssu6g0707 6 11037500 11042156 Ssu1g1485 1 34665810 34674748 PCT