Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1286 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGCGCGGCGGTGATGCTGTACTACGTACTGAGCCGGCGGCTGGCGCGGAGGGCGGAGAGCGACGGCGAGGATGGCGCCGGCGGCGACGTGTCGAAATCGAGCAGATCGGTCCGCCGGAGAAGGATTTCCCGGCGACCGGCGCAGCCGCCGGCGACGCTGCTGGAGTCAATCGTGACGCTGTCGGAGACTTTGAGGTTCACGTATTCCGAGACCCTCGGGAAGTGGCCCATCGGCGATTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTGGCAGTGGCTAGTGTGTATGCTGGGAGTGATTGTGTGCAGCTCAAAGGGGATGAGATTATTGTGGAGCTGTATGAGCTGTTGAGGCTTTTGACTTTGTGTATGCTTTTCTCCAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAGCCAAAAGCTGGGCTTCTGAAGCCTGCATTCACAATTATACGTGATACACAGTCAAAATGTTTACTTCTATTGATCCGGGGTACTCATAGCATTAAAGACACGCTGACAGCTGCAACTGGTGCTGTTGTCCCCTTCCACCATTCAGTTTTAAATGATGGTGGGATAAGCAACTTGGTTTTAGGATATGCACACTGTGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAGCTATGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCAGAGTTCAAAGTCAAgATTGTTGGGCACTCACTCGGTGGTGGTACTGCTGCACTGTTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACATGTGTCACATTTGCCCCAGCTGCCTGTATGACATGGGAGTTAGCAGAGTCGGGAAAGCACTTTATCACTACCATCATAAATGGTTCTGACTTGGTGCCAACATTCTCAACATCATCTGTTGATGATCTCCGTTCTGAGGTCACTGCATCCTCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACAAAGGTCCTGAATGTTGTCTACCGCTCGGCAACTGCACTTGGATCTCGCTTACCATCTATATCTAGTGCAAAAGCTAGGGTAGCTGGTGCGGGTGCTATCCTGTGGCCAGTAACCAGTGGCACTCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGCTCATCATTGTCATCATGGTCTTGCATGAGTGCACGCCGCCGAAATGTGGGTccatcattaaactctaaagcAGAAGACTTAACTGAAGCCTCTCTAATATCCGAGAGAAGCACCGAATCTCTAATGACTGAAGAGGTAGTAAGAGATCCTATTCTTAAGGATGAAAATACTTCCTCAAGTGGAGGATCTGGCCATGATGACACAGATGAAGAGGAACAACTCATTCCTGCTAATCAAGACATTACTGCATCAGCCGTAGTTGACATCACAGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAAAAACAGGATAGTACCTTGAACATTCATGCTCAAGAAGAGGCTGCAGCAGCAAAAGAAATCACTGAAGAAGAGAATCAACTAGTTGACGCTGCAGAATGCAGTAGTAATTCAATCACAACATCAGACAACTTGGACAGCCATCGATTTTATCCCCCTGGCAGGATCATGCATATTGTCTCTATACCTTCATCTGATgagtcaaattcaaattctGATGACCCTGTAGAAGAACGTGTCTGCTTATATGAAACTCCTAGAGAGCTGTACAGCAAGCTCAGACTTTCAAAAACGATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATACGAGAACTAGAGAAAGAAAGCAGctgtaatattttgaattaa 1920 0.4635 MAAGTMATAAGAAVMLYYVLSRRLARRAESDGEDGAGGDVSKSSRSVRRRRISRRPAQPPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPEFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSVDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSLNSKAEDLTEASLISERSTESLMTEEVVRDPILKDENTSSSGGSGHDDTDEEEQLIPANQDITASAVVDITEGQLWYELEKELQKQDSTLNIHAQEEAAAAKEITEEENQLVDAAECSSNSITTSDNLDSHRFYPPGRIMHIVSIPSSDESNSNSDDPVEERVCLYETPRELYSKLRLSKTMINDHYMPMYKKMMELLIRELEKESSCNILN 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1286 639 SUPERFAMILY alpha/beta-Hydrolases 157 324 IPR029058 -
Ssu1g1286 639 MobiDBLite consensus disorder prediction 30 46 - -
Ssu1g1286 639 MobiDBLite consensus disorder prediction 455 478 - -
Ssu1g1286 639 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 633 - -
Ssu1g1286 639 MobiDBLite consensus disorder prediction 30 57 - -
Ssu1g1286 639 Pfam Lipase 3 N-terminal region 51 125 IPR005592 GO:0016042
Ssu1g1286 639 CDD Lipase_3 177 328 - -
Ssu1g1286 639 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
Ssu1g1286 639 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 633 - -
Ssu1g1286 639 Gene3D alpha/beta hydrolase 157 358 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1286 Ssu-Chr1 28328413 28333215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1286 1 633 Acyl Lipid Metabolism Gene Families AT4G16070 66.165 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1286 - - gmx:100812454 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1286 1 28328413 28333215 Ssu1g1286 1 28328413 28333215 ECH
Ssu6g0354 6 5642976 5649567 Ssu1g1286 1 28328413 28333215 PCT