Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1215 atGGGTATCAAGTTGAATAGACCAGTCACTGTTGAGATTTTGTTTCGAGTTTTTATAGTTCTACCCTTGTTTAGTATTACAACTTCAGATGATCTACAACCAGCAAATTTTGTCTTCGGAGATTCTCTTGTCGATGTGGGGAACAACAATTACATTGCTTCCCTCTCAAAGGCTAATTATGTTCCCTTTGGAATTGATTTTGGAAGACCAACAGGGAGGTTCACAAATGGAAGAACCATTGTTGACATTATTGGTCAGGAACTGGGTATTGATTTTACCCCACCTTACTTAGCACCCACTACAGTTGGACCAGTGGTTCTGAAGGGTGTCAACTATGCTTCTGGTGCAGGTGGAATCCTCAATCTCACTGGAAAACTCTTTGGTGATCGAATCAACTTCGATGCACAGTTAGATAATTTTGCTAATACAAGGCAAGACATCATCTCCAGCATTGGTGTTCCTGCGACTCTCAATCTATTCAAAAGATCAATATTTTCAGTAACAATGGGTTCCAACGATTTCATTAATAACTATTTAGCACCAGCAGTCTTAATTGAGGAGAAGGAATTGGCATCTCCAGAACGGTTTGTGACCACCTTAGTGTCAAGGTTCAGAGAACAGCTCATTAGGCTATTCAATCTGGGTGCCAGGAATATTATTGTGACAAATGTGGGCCCTATTGGGTGTATACCAAGTCAGAGGGATATGAACCCAGCTGCGGGTGATGGCTGTGTCACTTTCCCCAATCAACTAGCACAGTTATTTAATATCCAGTTGAAGGGCCTCATTGCAGAGCTCAATTCAAATCTGAAGGGTTCAATGTTTCTTTATGCAGATGTCTACTACATTTTAGAAGATATACTCAACAATTACGTAGCATATGGTTTTGAGAACCCATCTACCGCTTGTTGTTACATGGCTGGGCGCTTTGGAGGTTTGATTCCTTGTGGTCCTACTTCGACCATTTGCTGGGACAGATCCAAGTATGTGTTCTGGGACCCTTGGCATCCTACTGAAGCTGCAAACGTTATAATCGCTAAGCGGCTCTTAGATGGTGATCATAATGACATTTTTCCGATAAATGTTCGCCGACTCATTCAAAATTTGACCTGA 1113 0.4151 MGIKLNRPVTVEILFRVFIVLPLFSITTSDDLQPANFVFGDSLVDVGNNNYIASLSKANYVPFGIDFGRPTGRFTNGRTIVDIIGQELGIDFTPPYLAPTTVGPVVLKGVNYASGAGGILNLTGKLFGDRINFDAQLDNFANTRQDIISSIGVPATLNLFKRSIFSVTMGSNDFINNYLAPAVLIEEKELASPERFVTTLVSRFREQLIRLFNLGARNIIVTNVGPIGCIPSQRDMNPAAGDGCVTFPNQLAQLFNIQLKGLIAELNSNLKGSMFLYADVYYILEDILNNYVAYGFENPSTACCYMAGRFGGLIPCGPTSTICWDRSKYVFWDPWHPTEAANVIIAKRLLDGDHNDIFPINVRRLIQNLT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1215 370 CDD SGNH_plant_lipase_like 34 353 IPR035669 -
Ssu1g1215 370 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Ssu1g1215 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 25 367 - -
Ssu1g1215 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 25 367 - -
Ssu1g1215 370 Gene3D SGNH hydrolase 32 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1215 Ssu-Chr1 26986098 26987883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1215 34 368 Acyl Lipid Metabolism Gene Families AT4G10950 36.391 6.93e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1215 - - gmx:100813870 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1215 1 26986098 26987883 Ssu1g1215 1 26986098 26987883 ECH
Ssu6g0420 6 6512584 6513921 Ssu1g1215 1 26986098 26987883 PCT