LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst9g03048	ATGAAGGAGGATACTGAGCTTGAGGAAGGAGAGGCTTGCTATTACAAGGATGACGATGAAAACAACATTGACCCTGATTCTTTCTCATACATTGATGAAAAGATTCAACATTTTCTTGGCCATTTTCAAAAGGAATTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTTTACCTACCCAAGAGCGTTCTCCTTGTATACGGTCTCATCCAAGGACTCCACAAAGAAATCACAACTCACCAAAGTTTAATAACAATCTCCACATGGAGGCTGTGTCTCATAACAAAAAAGCACCTACAAATGTGCCTCCTCCAACAAGGCCTGAAAATGTCTCTGGTAGTTCACATCCTTTCCGTGATTTAAGAGAAGCTTCAGTAAATAATTTAGTGAAGAAAGAGCAAGGAATTTCTTCCGGTGATATAGCTGAGAGGTGCACTTTGAAACATGTTACTACAAAAATTACCGAGAATTCAACTGACCAAAGGACACTGAAGTTTCGAATCAAAATGAAATCTAATATCCTAGCACAAAAGAATGCAGAAATTTATAGTGGCCTTGGACTTGATGACTCTCCCTCTTCCTCAATGGGGAACAGCCCTGGGGAAAGTGAAGGCATGCCACCTGTATATCAAGAGAGTGCTGAAGATTCTCCAACTGGCATTATTCAGGTTATGACTTCTTTTCCTATCCCTGGGGGTGTTCTAATATCTCCTCTACATGAAATTGTGCTCAACCTGATGAAAAATGATAAAGTTATTGGAGATAACAGAATTTCATCCTCTCTTAATGGTCGTCAAGATCTTTGTTCCATGTCTACTGATGAATCAGATTCTTTTGTGGGTGCTGGGCATTCGAAGAACATGATGAGAATAGTGAGACAAAGTGACATGCAATTGGAATTGAAGCATCCGAATGGCACCCTTTCTGAGAAGGATACTACATTGCATAAAAAGAAAAAATTACGAAATAGAACACCAGATCATAAAGATTTCCTCTCTAATGAATTGAAATGGACACCTCTGTCAAGTTCAATTTGTGATGCTGGTGAAACTGCTGAAGGCACTGCTAAAGCGATTAAACCCTCCAAGAAGGTTAATGAAAATGGGGTGCAAGGTAGAATGGTTTCTGAAGAAGCATTGAAGGAAGAGTCATTGGAATCAATATCTGGTCAAGATTTTGGGAAGACTGTAAAACAAACTGCAGGAAATGGTTTTATGAAAACTGCTTTAGAGCATAAACTGGAAAGTTCCCACAAGGATAATTCTATGAACCCTAAGAATAATAACACGAGTAGTAATTCCATTATTTCCAATAAGTTTGAACGTGATGTAAAATGTAAGGTAGATCATAAGTCTGAGATCCATCAGAAGGTAAAGGCTGTGTGTGAGCGGAAGAATAAGTCAATAGGTGATCAAAGTGCTGGAAAATCTGAGGCTGTTGCAAGAAAAGATAGCTTTGGTGGTACTAATAATGCAATGGTGATTGATAAAGGGAGTGCTAGCTTTGACAATGCTTGTAGAAGTAAAATGAAGTCAAGGTCACCGATGGACCAAAAGTGCAGTGATAGTAACAGGGATTCAATGAAAGAAAAAAGATCAGAATGGAAGGTTGACAGTCTTGTTGGTAATGGTGCAATAAAAAATGCTAAAATTAGTAATGGAAAACACAATGCATTTGGGTCTAAAGTAAAGGAGAGAATGACTGGCCATAAAGTGGTCAACCCGCAAGCTGGGCCATGCATTAAAGAGACATCAGCTTCACTTCCTATTGCTGAAAGCAACCTTGCACCTGAGATGATTTCATCAGCAGTAGCTGCTCCTCAGCTTATTGCAGAAGATTGGGTATGTTGTGACAGTTGCCAGAAATGGCGGCTACTACCTACTGGTACGAAGCCTGAGCATCTTCCAGAGAAATGGCTGTGTAGCATGCTAAATTGGCTGCCTGGGATGAATTCTTGTGAGTTCAGTGAGGATGAGACAACAAAAGCACTCTATGCCTTATATCAAATGCCAATTTCTCAGGTTCAAAGTAACATTCAAAGCCATGGCACTGAAACTGCACTTGGAGTTAGCTCTACTAATTCTTTTCAATATGGCCTAAATCAAAATATGTGTAGTTCTGATATGTGTGACAGAGGAAGGAAGAAACTTGTTATTAAGGAAAAGGCAATTTCAGGAATAAATAATGACATGCGTCGGTTCTCAAATTCAGTGAAGGCCAATGTTCAGGTATCTGGAAAAAATAGAAGCTTGAATGGCTTGAATCAGCATCCTGCTGACTTTAACCCAATGAAGAAGATGAGCTCTTCTAAACAGCTTGGTAAGCCTGACAAAATGATAGAAGAGAAACATGTGCCTAAAGAGAATGAAAAGAAAGTAAATGGAGATGATAGAAAGCATGTTAAGTTGAAACGGAAGCTGGATGCTGATCAATACAAATCAGGAATTCCCAAGAAATCTAAAACTGAAAATGTTTTCTATGTTAATAAACAATTGAATCCTGACATGCACCTTGAGAAGGTGTCTGTATATTCAAGAAACGGTATGCCAACAAAAGCTAGTGGAAAGGATATGAGAAAGTATGATGAATATTGTTTATCTGAGGATGCACAGGACAGATTACCAGTCACTGTAACGAAAGAGGTAGATCAGGCTCAGGGCTCATCTGGTTTAACGAAGAAAAGGAAATTGAAGGACGGGCCGGATGATGAAAAGCAGTATGGTGAAGAGGGTGATACAAATGAATTTAGCAAGGAAAAGAAATACAGAATTTTGAATAAAAAGGCAAAGTCAGTAACTGAAGGTGACAATAAATTAAGCAAGGGTGGGATGAGGCAAGTTTGCTTGGCAGGCAATGGGGACCAAATGGCTATTGGCACAGAAGTCAGACTTGGTGATAAAGGCAACCAACTAAGGAAGCATAGAAAAAATGTTGCATCTCTTGACGCTTCAGATGGTATTGATCAATTGGGCAAGAATTTGAGCACTAGACCACATTCTTTGGTAGCAACTTCAAGCTCTTCAAAAGTCTCAGGTTCTCATAAAGCTAAAACCAAGCTTGGAGATGTGAGAGGTTCACCTGTTGAATCTGTTACCTCCTCACCTTTGAGGGCCTTCAACATGGATAAGAATAATTTTTCACTAGGAGACACTTCAGTGAAAGACAATGTTACAAAAGGTTGCCTCTCTTCAGTAGGTTCCAAGAGAAATGTGAATAATAGGGAGAGAAAGCTATCAGTAAAATTGAAGGAGGGTAGAGTTCCGCATGATTTACATTATGCATCCCAAAAATTATCTTCAATAGAGTACCAGGTTGAGGATGCTGAAGATACATCCAGGCTCCAAGCAAAAAAACCTTCTGAACTAAAGAATATTGAAGGTGGTGTTTGTGTTGAACAACCTGGCTATTGTGCTAATGGTGTACACCATGAGGAGAAAGTAAACAAGGAAAACCAGGAAAGTGAACTTTCTTGGCAGAAATCTGGTAAGGTGCTGAAAAAAAGGGAGAAAGGCAGAAAGTTTGGTTCTCATGTTGGTACAGATAACATGAAGATATCAGTTGCAAAGACTGATGGTTATTCAAAGAAAGGTGGGAGGTATGATTCAGTAGTTAATCCCAGTAACCATGCATCAGGTGCTGAGACAAAAAATGTTGTTAAATATACTTTCCCCAAGTCTAAAAGTGAAATTAACAGTTTTAGTCAGAAAAGTGCTTTAGGACATCAGCTAAATGAAACTGGAAAGCAAACTGAGATAAAACCAAGAGATTTTGAGAGTTCAGTCCCAAATATGGATGCTCAATGCAGCAGTGAGAGAAAGACTATCTCCCTGCAAAACCCGACCCATGATCTTGAGGAAGAAAACAAAGTCAAAGTTAATCATGTAATCGAAGAATCAAGAGTTGTGAAATCAAAAGTTCCCTCATCTGCAGCAGGGGAAGTAAAGAGGGAAGCATTGAGTGTGGGTTCTAGAATTGTACCTCAGTATCAAAAGGGAAGCATGTCTAATGAGCATCCTGTCAAGGTTTTGGGCAATAGTGATTTGGTCAATTCAATCAGAAATTATGCTAATGTTAGTAACAATGCTGCGGCAAATTGTAGTTCTGGAAATTCTGTACCTGATCAGCAACCCACTGTGTCAAGTCCTGTGAGAACAAATTTTAACCAAACTTCTGTTGACACCCTGGAAGAAGCTGCAAAATTAAAAGAAAGAGCAGATAATTATAAGAACTCTGGGTTTGCCTTTGAAAGCAATGAGACATACTTTCAAGCTGGTGTGAAGTTTCTGCATGGAGCGTCTCTTTTAGAAAATTGTCACAATGAAATTAGCAAGCATGGGGAAATGAGTCAAATGCAAATTTTTTCTACTGCAGCCAAACTTTTCAAATGCTGTGCCCATGAATATGAAGCTCGGCAAGAAATGGCTGCTGCTGCTTTGGCATATAAATGCATGGAGGTAGCATACATGAGAGTGGTTTACTGTAAAAATTCCAGTATCAACAGAGATCGACATGAGTTACAATCAACTCTTCAAATGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCCGATGTTGATAACCTATACAATCAGGCAGCAGCAGATAAGGCTACTTTGCCTAGGGGTACTAATACTCATGCTGCTATCAACCAAGTCATATCTGCTCGAACTCATCCAAATTTAATCAGGCTTCTTGATTTCACTAAGGACATACATTTTGCTATGGAGGCTTCTGAAAAATGTCAGAACACTTTCACGGCTGCTAATGTGATCATGGAAGAAGCACGGAATAAGGACTGTATAGCTTCTATCAGGAGTGTTATTGAGTTCGGCTTCCAGGATGTAGACGAGCTTGTACGTCTGGTTTGGACCGCAACAAAAGCCATAAGTCGTGCCGGTCTTGGTGGTGCTAGAGATTAA	4947	0.3954	MKEDTELEEGEACYYKDDDENNIDPDSFSYIDEKIQHFLGHFQKEFEGGVSAENLGAKFGGYGSFLPTQERSPCIRSHPRTPQRNHNSPKFNNNLHMEAVSHNKKAPTNVPPPTRPENVSGSSHPFRDLREASVNNLVKKEQGISSGDIAERCTLKHVTTKITENSTDQRTLKFRIKMKSNILAQKNAEIYSGLGLDDSPSSSMGNSPGESEGMPPVYQESAEDSPTGIIQVMTSFPIPGGVLISPLHEIVLNLMKNDKVIGDNRISSSLNGRQDLCSMSTDESDSFVGAGHSKNMMRIVRQSDMQLELKHPNGTLSEKDTTLHKKKKLRNRTPDHKDFLSNELKWTPLSSSICDAGETAEGTAKAIKPSKKVNENGVQGRMVSEEALKEESLESISGQDFGKTVKQTAGNGFMKTALEHKLESSHKDNSMNPKNNNTSSNSIISNKFERDVKCKVDHKSEIHQKVKAVCERKNKSIGDQSAGKSEAVARKDSFGGTNNAMVIDKGSASFDNACRSKMKSRSPMDQKCSDSNRDSMKEKRSEWKVDSLVGNGAIKNAKISNGKHNAFGSKVKERMTGHKVVNPQAGPCIKETSASLPIAESNLAPEMISSAVAAPQLIAEDWVCCDSCQKWRLLPTGTKPEHLPEKWLCSMLNWLPGMNSCEFSEDETTKALYALYQMPISQVQSNIQSHGTETALGVSSTNSFQYGLNQNMCSSDMCDRGRKKLVIKEKAISGINNDMRRFSNSVKANVQVSGKNRSLNGLNQHPADFNPMKKMSSSKQLGKPDKMIEEKHVPKENEKKVNGDDRKHVKLKRKLDADQYKSGIPKKSKTENVFYVNKQLNPDMHLEKVSVYSRNGMPTKASGKDMRKYDEYCLSEDAQDRLPVTVTKEVDQAQGSSGLTKKRKLKDGPDDEKQYGEEGDTNEFSKEKKYRILNKKAKSVTEGDNKLSKGGMRQVCLAGNGDQMAIGTEVRLGDKGNQLRKHRKNVASLDASDGIDQLGKNLSTRPHSLVATSSSSKVSGSHKAKTKLGDVRGSPVESVTSSPLRAFNMDKNNFSLGDTSVKDNVTKGCLSSVGSKRNVNNRERKLSVKLKEGRVPHDLHYASQKLSSIEYQVEDAEDTSRLQAKKPSELKNIEGGVCVEQPGYCANGVHHEEKVNKENQESELSWQKSGKVLKKREKGRKFGSHVGTDNMKISVAKTDGYSKKGGRYDSVVNPSNHASGAETKNVVKYTFPKSKSEINSFSQKSALGHQLNETGKQTEIKPRDFESSVPNMDAQCSSERKTISLQNPTHDLEEENKVKVNHVIEESRVVKSKVPSSAAGEVKREALSVGSRIVPQYQKGSMSNEHPVKVLGNSDLVNSIRNYANVSNNAAANCSSGNSVPDQQPTVSSPVRTNFNQTSVDTLEEAAKLKERADNYKNSGFAFESNETYFQAGVKFLHGASLLENCHNEISKHGEMSQMQIFSTAAKLFKCCAHEYEARQEMAAAALAYKCMEVAYMRVVYCKNSSINRDRHELQSTLQMVSQGESPSSSASDVDNLYNQAAADKATLPRGTNTHAAINQVISARTHPNLIRLLDFTKDIHFAMEASEKCQNTFTAANVIMEEARNKDCIASIRSVIEFGFQDVDELVRLVWTATKAISRAGLGGARD	1648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	70	99	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	70	126	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	756	806	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	195	222	-	-
	Spst9g03048	1648	PANTHER	CW-TYPE ZINC FINGER	1	1640	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	779	806	-	-
	Spst9g03048	1648	Pfam	CW-type Zinc Finger	622	667	IPR011124	GO:0008270
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	900	923	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	515	542	-	-
	Spst9g03048	1648	Gene3D	-	617	671	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	1005	1039	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	1005	1022	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	889	923	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	1374	1393	-	-
	Spst9g03048	1648	ProSiteProfiles	Zinc finger CW-type profile.	616	669	IPR011124	GO:0008270
	Spst9g03048	1648	Coils	Coil	1399	1419	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	756	777	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	1156	1186	-	-
	Spst9g03048	1648	MobiDBLite	consensus disorder prediction	518	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst9g03048	Spst-Chr9	64510425	64518348	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst9g03048	-		-	vra:106762170	2526.9

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst3g03067	3	80429925	80438118	Spst9g03048	9	64510425	64518348	PCT