Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03067 ATGAATGAGGGTTACTATTCGGGTTTTGGGGTTAATTTTGTGATGGTCGAGATGCAACGCAATAATACTGAGTTGGAGGAAGGAGAGGCTTTCTATTGTTATAAGGATGACGATGATGACAACATTGACCTTGATTCTCTCTCTTACATTATTGTTGATGGTATGCAAGCTTGCATTTTTATTTTGCCCGATGAGAGGATTCAGCATGTTCTGGGTCATTTTCGAAAGGAATTTGAAGGAGGTATTTTTCCTGAGCGTTTGGGTGCAAAATTTGGTGACTATGGCTCTTTTTTGCCCACCTATGAACGCTCCCCTCGTTGGCAATCTTGTCCAAAGGATCCAGAAAAACACCATAGTTCACAAAAATTTCCCAGCAATATCCATATGGCGGCTGCATTTTATAACTCAAAAGCACCTTCAAATATGCCTCCTTCCATGAGGCTTGGAACTGCTTCCCATAAAGTTCTTGCATCTCAAGATACAAGAGTAACTTCAGTGAACAACACAGGCATTTCCTTGAATAAAGTAGCAGAGAAGTGCAGTTTGAAAGATGACTGCACAAATAAGTCAAAGAAGTTGACTGATCAAAGAATGCTGATATCGCAAATCAAAGTGAAATCAGATAGCTTAGCAAAGAAGAATGCAGAAATTTACAGTGGTCTTGGACTTGATGACTCTCCTTCTTCCTCAACGGAAAACAGCCATAAGGAAAGTGAAGATATGCCTCGTGTATCTCAAGATTCGCCTGTAGAGTCTCCTGCTACCATTGTTCAGGTAGAGGACGTGTTCTATTTCTATGAAACACTTAAGGATATGTTGTCCAGCGGTGTGCTAATATCACCTCTACATGACAGTCTACTCTACTTGATTAGAAAGGAAAAATCCTTTAGAGACCGAAGACCCATTTCTTCTCTTAATGGTCATCAGGAACATTATTCCATGTCAACTGATGAGTCAGATTCTGTTGCGGGGGATTCACATTTGTTGAAGAAAAGGAAAGTGACAGTGATAGACCAAAGTGAAAAGCATCATATGAATGGTAACTGTTCTGATAATGACATGACATTGCATATGAAGAAAAGATTAGGAAATAGAACTCCAGATCGTAAGGACTTTCTGTCTAACGATCTGAGACGCACACCACTGTCAAGTTCAATTTGTGATGGTGAAATGGCTGAAGTCACTGGTAAGGCTATTGAAGTATTCAAGGAGGTCAATAAAAATGGTGTGGAATGTAGAATGGTTTCGACTGAAGCAGTGAAAGAGATTTCACTGGAGTCAATATCTGATCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGAAGTAGCTTTACGAAAAAAGTGTCTGCTGATCCTAAGAATATTAGCAATTGTAACACTTCTGCAATTTCAAAAAGGATTAAGTCCGATGAAATGAAATATAAGGTGGATCAAGATACTCAAAAGTGTGATACTAATCAGACCAAGGTAAAATCTGAAAGGAAGAACGAGTCAAAAGGTGAGCAGGGACCTAGAAAAGTTGTTACTGATGCTGAAAAAGATATCTTTGGTACTAGTAATAATGTAATGGTAAATGATAGAAAGTTTACTAGCATTGGTGTTACTTCTTCTAAAAGTAAAATGCATAAAGTGAAGTCACTGAAGGATAATAAGGTCAGAGATTGTGACAGAGGTTCACCAAAAAGAAAACCACAACGGAAGGTTGATGGAATAGATCCAACTGATGGGCCTCCCCTTAACAAGGCTACAGTAAATTGTAACCTTAATCATGTTGAAAAGAATGCAAGTAGGGTTAAAGTAAAGGAAAGAGCAAGTGGCAATAAAGTGGTTAATCAGTTGACAGCTGCGCCATGCGCAAAAGATACTCCAGGTGCATTTCCTGATGCTGAAAATAAACCAACTTCTGAGATGGTTCTGTCATCATCAGCAGGAGCACCTCAACTTATTGAAGAAGATTGGGTATGCTGTGACATTTGCCAGAAATGGAGGCTTCTACCTATGGGTTTAAAGCCAGATCAACTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGTTGTAGCATCAGCGAGGAGGAGACTACAAAAGCACTTTATGCTTTATATCAAATGCCAATTTTTGAGGGTCAAAGTAACATGCAAATCGATGCCACTGGACCTGAAATTGGAGTGAAATCTGTTGATACTCTACAACTTTGCCCTATTCACAAAAAGCCCAGTTCTGATGTAATGCTTGATCAAGGGAGGAAGAAACAAGGTAGTAATGAGAAGGCGAAGTCAGGAATCAATAGTGACAGGCATCAGTTGTCAAATACAGAAAAGAACAATGCTCAAGAGTCTGTTAAAAATAGAAGCTTGAATGACATGAATGAGTGGCCTGCAGGTTCAAAACGAATGAAGAAATCTAATTCTCAAAATTTGAGCAGGTTGAACAATTTGATAGAAGAGAAAAACTCACATAAGACAAAAGAATATCGAATGAATGGAGAATATGCCAATGTGGTTGTCAAATCTGTTCAGGTGACACAAATCAGGTTAGATTGA 2562 0.3891 MNEGYYSGFGVNFVMVEMQRNNTELEEGEAFYCYKDDDDDNIDLDSLSYIIVDGMQACIFILPDERIQHVLGHFRKEFEGGIFPERLGAKFGDYGSFLPTYERSPRWQSCPKDPEKHHSSQKFPSNIHMAAAFYNSKAPSNMPPSMRLGTASHKVLASQDTRVTSVNNTGISLNKVAEKCSLKDDCTNKSKKLTDQRMLISQIKVKSDSLAKKNAEIYSGLGLDDSPSSSTENSHKESEDMPRVSQDSPVESPATIVQVEDVFYFYETLKDMLSSGVLISPLHDSLLYLIRKEKSFRDRRPISSLNGHQEHYSMSTDESDSVAGDSHLLKKRKVTVIDQSEKHHMNGNCSDNDMTLHMKKRLGNRTPDRKDFLSNDLRRTPLSSSICDGEMAEVTGKAIEVFKEVNKNGVECRMVSTEAVKEISLESISDQDFDKIEKQNTGSSFTKKVSADPKNISNCNTSAISKRIKSDEMKYKVDQDTQKCDTNQTKVKSERKNESKGEQGPRKVVTDAEKDIFGTSNNVMVNDRKFTSIGVTSSKSKMHKVKSLKDNKVRDCDRGSPKRKPQRKVDGIDPTDGPPLNKATVNCNLNHVEKNASRVKVKERASGNKVVNQLTAAPCAKDTPGAFPDAENKPTSEMVLSSSAGAPQLIEEDWVCCDICQKWRLLPMGLKPDQLPEKWLCSMLYWLPGMNRCSISEEETTKALYALYQMPIFEGQSNMQIDATGPEIGVKSVDTLQLCPIHKKPSSDVMLDQGRKKQGSNEKAKSGINSDRHQLSNTEKNNAQESVKNRSLNDMNEWPAGSKRMKKSNSQNLSRLNNLIEEKNSHKTKEYRMNGEYANVVVKSVQVTQIRLD 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03067 853 MobiDBLite consensus disorder prediction 230 244 - -
Spst3g03067 853 PANTHER CW-TYPE ZINC FINGER 18 834 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 221 252 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 745 810 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 770 796 - -
Spst3g03067 853 Pfam CW-type Zinc Finger 654 699 IPR011124 GO:0008270
Spst3g03067 853 Gene3D - 646 703 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 538 582 - -
Spst3g03067 853 ProSiteProfiles Zinc finger CW-type profile. 648 701 IPR011124 GO:0008270
Spst3g03067 853 MobiDBLite consensus disorder prediction 474 510 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 301 324 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 748 769 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 548 571 - -
Spst3g03067 853 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03067 Spst-Chr3 80429925 80438118 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03067 - - gmx:100793863 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03067 3 80429925 80438118 Spst3g03067 3 80429925 80438118 ECH
Spst3g03067 3 80429925 80438118 Spst9g03048 9 64510425 64518348 PCT