Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03047 ATGTTTAGTCCGAGCATGGATTCTTCAAGGGATGCGGGTGGTGTGGCAGGAACAGTACTAATTCCTATGCGTTTTGTGTGGCCATATGGAGGAAGGAGTGTGGTTCTCTGTGGTTCTTTCACACGTCCTGCTTATCTCTCTCTTTATCGAAAATTTTATCTGAAAGGTGGTCTGAGCCTCTACCGATGTCGCCTGTGGAAGGATGTCCAACAGTGTTTCAAGTTATTTATAATTTGCCACCCGGTTACCATCAGGTCAGCTTATAATTATGTTACCAGATTAATGTACAAGTTTTTTGTTGACGGAGAATGGCGGCATGATGAACATCAACCTTACGTACCTGGAGAATATGGAATGGTCAACACTGTCTTCTTGCCCACTGATCCTAACTACATGCCTGTTTTGACTCCAGATGTTGCACCTGGAAATAGCATGGATGTGGATAATGAGGCTTTTCGCCGAATGGTCCGGTTGACCGATGGTACATTGAGTGAGGTGCTGCCAAGAATATCAGATGCTGATGTACAAATCTCCCGCCAGCGAATTTCTGCATTTCTGTCTTCCCACACTGCTTATGAATTACTTCCCCAGTCAGGCAAGGTTGTTGCTTTGGATGTTGATCTACCAGTGAAACAGGCATTTCATATACTGTATGAGCAGGGAATTTTCATGGCTCCTCTTTGGGACTTCTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTATTTTAATTTTAAGAGAGCTGGGGAATCATGGGTCCAATCTGACAGAGGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAGTCGTATCTAAATAGACAGAACAATGGACATGGAACTGTGTTTTCAAGACGTTTTATCCATGCAGGGCCATACGATAATCTGAAAGATATTGCCGTCAAGATCTTGCAAAAGGAGGTTTCGACAGTTCCTATTATCCATTCTTCTTCTGAAGATGCTTCATTTCCACAGTTACTACACCTTGCTTCACTTTCAGGAATACTTAAATGCATTTGTAGGTATTTTAGGCACTGTTCTAGTTCCTTGCCTGTACTTCAATTTCCAATCTGTGCAATACCGGTGGGCACGTGGGTGCCCAAAATTGGGGAATCAAATCGGAAGCCTCTAGCAATGTTGAGACCAACCACTTCGCTTGCTTCAGCCCTAAATTTATTAGTTCAAGCCAAAGTAAGCTCAATACCTATAGTTGACGATAATGACTCATTACTGGATATATATTGTCGGAGATGCACTACTGCACAAAGGTTATTGTCAGATTTCTTTTTTGTCTTGGATGCTTTGCAGTTGGGCCAGGACGCATATAGTCCCTATGAGCTTAGAAGTCAAAGATGTCAGATGTGTTTGCGTTCTGATTCTCTGCATAAAGTGATGGAACGCTTGGCAAATCCAGGTGTCAGGCGGCTTGTGATCGTGGAAGCTGGCAGCAAACGTGTAGAAGGCATTGTTTCATTGAGTGACATATTCAAGTTCTTCCTTGGGGGTTAG 1527 0.4309 MFSPSMDSSRDAGGVAGTVLIPMRFVWPYGGRSVVLCGSFTRPAYLSLYRKFYLKGGLSLYRCRLWKDVQQCFKLFIICHPVTIRSAYNYVTRLMYKFFVDGEWRHDEHQPYVPGEYGMVNTVFLPTDPNYMPVLTPDVAPGNSMDVDNEAFRRMVRLTDGTLSEVLPRISDADVQISRQRISAFLSSHTAYELLPQSGKVVALDVDLPVKQAFHILYEQGIFMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLNRQNNGHGTVFSRRFIHAGPYDNLKDIAVKILQKEVSTVPIIHSSSEDASFPQLLHLASLSGILKCICRYFRHCSSSLPVLQFPICAIPVGTWVPKIGESNRKPLAMLRPTTSLASALNLLVQAKVSSIPIVDDNDSLLDIYCRRCTTAQRLLSDFFFVLDALQLGQDAYSPYELRSQRCQMCLRSDSLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFFLGG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03047 508 SUPERFAMILY CBS-domain pair 379 507 IPR046342 -
Spst9g03047 508 ProSiteProfiles CBS domain profile. 194 256 IPR000644 -
Spst9g03047 508 SMART cbs_1 200 249 IPR000644 -
Spst9g03047 508 SMART cbs_1 382 430 IPR000644 -
Spst9g03047 508 SMART cbs_1 457 506 IPR000644 -
Spst9g03047 508 SUPERFAMILY CBS-domain pair 181 351 IPR046342 -
Spst9g03047 508 Pfam CBS domain 380 417 IPR000644 -
Spst9g03047 508 Pfam CBS domain 460 506 IPR000644 -
Spst9g03047 508 Gene3D - 362 508 IPR046342 -
Spst9g03047 508 SUPERFAMILY E set domains 22 128 IPR014756 -
Spst9g03047 508 Gene3D Immunoglobulins 21 133 IPR013783 -
Spst9g03047 508 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 174 505 - -
Spst9g03047 508 CDD E_set_AMPKbeta_like_N 22 124 - -
Spst9g03047 508 ProSiteProfiles CBS domain profile. 453 508 IPR000644 -
Spst9g03047 508 Gene3D - 171 354 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03047 Spst-Chr9 64497358 64505422 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03047 - - gmx:100785692 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03068 3 80476282 80490463 Spst9g03047 9 64497358 64505422 PCT