Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03068 ATGTCAAGGTACCGTGAAGTTGCTGAAATTGTTCTTAGATACCTTGAGCATCGGGATCGGCTTGTTCGTTTGAGCATAACTTCATTGCTGCCTCGTATTGCACATTTTCTTCGTGATCGTTTCTGGGTTCATTGCTCTTGGAGAGATGGGGAACTGGATGGGGAACTTATCCATTATTTACCGATAATTACTATTCACTTACGGGAGGCGATTGCTCCACGTAGGATCAAACCTTCACTTGAGGCCTTGGCTTGTGTTGGAAGTATTGCTAAAGCAATGGGCTCAGCAATGGAACCTCATGTACGAGGACTTTTGGATATAATGTTTTCTACCGGCCTTTCTACAGTACTTGTGGAGGCCCTTGAGCAAATAAGTACCAGCATTCCATCTCTGCTGCCAACCATTCAAGACCGATTACTAGACAACATATCCATGCACTCTGAATTTGGAGGTAAAATGTTCAGTCCAAGCATGGATTCCGCGAGGGATGCTGGTGGTGTGGCAGGGACTGTGCTAATTCCCATGCGGTTTGTGTGGCCATATGGGGGAAGAAGTGTGTATCTAACTGGTTCTTTCACACGCATAAGAGAGTTATTTGCTGAGTACAAGTTTTATGTCGATGGAGAATGGCAGCATGATGAGCATCAACCTTGTTTATCTGGAGAATATGGGATAGTTAACACCGTTTTATTGGCTACTGATCCTAATTTTGTACCTGTTTTAACTCCAGACATAGTTTCTGGATCTAACATGGATGTGGATAATGAGGCTTTTCGACGCATGGTACGATTGACAGATGGTACATTAAGCAACGTGTTGTTACCTAGAGTATCTGATGTTGATGTACAGACCTCTCGTCAGCGTATTTCTTCATTCCTATCTACATGCACAGCGTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTACCTTGGATGTTGATCTGCCTGTGAAACAGGCATTTCACATACTGCATGAGCAGGGAATTCCCATGGCTCCTCTTTGGGACATCTGCAAGGGGCAGTTTGTTGGAGTTCTTAGTGCCTTGGATTTTATTTTAATTTTAAGAGAGCTTGGAAATCATGGGTCCAATCTGACGGAAGAGGAGCTTGAAACACATACCATATCCGCTTGGAAAGAAGGAAAATGGACAGCATTTACACAATGTTTTATCCGTGCAGGGCCAAATGATAATTTGAAAGAGATTGCTGTGAAGATCCTGCAAAATGGAATCTCAACAGTTCCTATTATTCATTCATCTTCTGAAGATGGCTCATTTCCCCAGCTACTACATCTTGCTTCACTTTCAGGAATCCTTAAATGCATTTGCAGGTATTTTAGGAATTGTTCTACTTCATTGCCCATACTTCAACTTCCAATCTGTGCAATCCCTGTGGGCACATGGGTTCCCAAAATTGGGGAGTCAAATTGCCAGCCTCTAGCAATGTTGAGACCAAATGCTTCGCTTACTTCAGCCCTAAACTTATTAGTTCAAGCTCAAGTAAGTTCAGTACCAATAGTTGATGATAGTGACTCGTTACTGGATATATATTGTCGAAGTGATATAACAGCTTTGGCAAAGGACAGAACTTATACACATATTAATCTTGATGAAATGACTGTTCATCAGGCGTTGCAATTGGGGCAGGATTTTTACAGTCCTTACGAGGCAAGAAGTCAAAGATGTCAGATGTGCCTGCGAACTGATTCTCTGTATAAAGTGATGGAACACTTAAATTTGAAGAATGCTGCACTGGATTCAGGTGTGAGGCGGCTTGTTATTGTGGAAGCTGGTAGCAAGCGGGTTGAAGGCATCATATCACTGAGTGACATATTCAAGTTCTTCCTTGTCAGGCAACCACCATCGGCCCAGCCGAGGCCACTAAGAAGAGATTCCAGAGCTTTTACACGGTGA 1914 0.4295 MSRYREVAEIVLRYLEHRDRLVRLSITSLLPRIAHFLRDRFWVHCSWRDGELDGELIHYLPIITIHLREAIAPRRIKPSLEALACVGSIAKAMGSAMEPHVRGLLDIMFSTGLSTVLVEALEQISTSIPSLLPTIQDRLLDNISMHSEFGGKMFSPSMDSARDAGGVAGTVLIPMRFVWPYGGRSVYLTGSFTRIRELFAEYKFYVDGEWQHDEHQPCLSGEYGIVNTVLLATDPNFVPVLTPDIVSGSNMDVDNEAFRRMVRLTDGTLSNVLLPRVSDVDVQTSRQRISSFLSTCTAYELLPESGKVVTLDVDLPVKQAFHILHEQGIPMAPLWDICKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKWTAFTQCFIRAGPNDNLKEIAVKILQNGISTVPIIHSSSEDGSFPQLLHLASLSGILKCICRYFRNCSTSLPILQLPICAIPVGTWVPKIGESNCQPLAMLRPNASLTSALNLLVQAQVSSVPIVDDSDSLLDIYCRSDITALAKDRTYTHINLDEMTVHQALQLGQDFYSPYEARSQRCQMCLRTDSLYKVMEHLNLKNAALDSGVRRLVIVEAGSKRVEGIISLSDIFKFFLVRQPPSAQPRPLRRDSRAFTR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03068 637 Pfam Glycogen recognition site of AMP-activated protein kinase 201 234 IPR032640 -
Spst3g03068 637 Gene3D - 278 451 IPR046342 -
Spst3g03068 637 ProSiteProfiles CBS domain profile. 558 622 IPR000644 -
Spst3g03068 637 Gene3D - 459 631 IPR046342 -
Spst3g03068 637 SUPERFAMILY CBS-domain pair 478 616 IPR046342 -
Spst3g03068 637 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 283 618 - -
Spst3g03068 637 SUPERFAMILY E set domains 173 232 IPR014756 -
Spst3g03068 637 Pfam CBS domain 564 615 IPR000644 -
Spst3g03068 637 Pfam CBS domain 479 523 IPR000644 -
Spst3g03068 637 ProSiteProfiles CBS domain profile. 474 532 IPR000644 -
Spst3g03068 637 ProSiteProfiles CBS domain profile. 301 363 IPR000644 -
Spst3g03068 637 CDD E_set_AMPKbeta_like_N 174 230 - -
Spst3g03068 637 SMART cbs_1 307 356 IPR000644 -
Spst3g03068 637 SMART cbs_1 561 616 IPR000644 -
Spst3g03068 637 SMART cbs_1 389 443 IPR000644 -
Spst3g03068 637 SMART cbs_1 479 527 IPR000644 -
Spst3g03068 637 SUPERFAMILY CBS-domain pair 286 447 IPR046342 -
Spst3g03068 637 Gene3D Immunoglobulins 194 239 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03068 Spst-Chr3 80476282 80490463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03068 - - gmx:100810976 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03068 3 80476282 80490463 Spst3g03068 3 80476282 80490463 ECH
Spst3g03068 3 80476282 80490463 Spst9g03047 9 64497358 64505422 PCT