Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02931 ATGATAGTCAACCAACTTGGAAGTTGGACAATCCAACAAAGGCTGGATAGTATGGAGGGAAGAATCAATTGTAAACAATTTAGGATAAGAGAAGGTTATGGAAAATTTCTACCATCTTATAAGGCATGGGGGAACAGAAGATGGGGTGCAAAATCAAATGGTCAATCAGATGGAGTTGCAGATATGCGTCTTGGACATGGTGCAGAATGGGATATGAATGATGGAGGCCATGGCCAAATTGGGTGCTGCGTGGTCCTGAAAATTCTCAGCAAGATTCCGGAGGACTTTTATCAAACAGCAACTGGGCATTCATTACCTTCCCATACACTGCAATACCTCACTTTCATCGACTTCTTTTCTCTCTTCTTCTTCAACATAAACATGGTTAAGATGGAAGAGGATAAAGAGAGAAAAATTGTGCTGACAAAGCCATTAACAATAGGAAGAGAATCTGATTCAGACTCGTATAAAGCTCCTAATCTTATGCAACGAATACTCAGTTTATTCAAGAATGTACGCCCCGGTTCTGATCTTACACGCTTTCAGCTTCCACCACTATTCAACTTACCGAAGTCACAACTTCAGTGCTATGGTGAATCAGTGTATTGCACAGGTTCAGACTTGCTAAGCATGTGCAACAATGGTGAGAGTCCTATGGACAGGTTCATATCTGTTGTAGCATGGAGCATATCTACCTCTCGCCCTGTGACTTTTGGGGTTGCTCCTTATAATCCAATTCTTGGTGAGACACACCATGTTTCAAAGGGAAACCTTAATGTGTTATTGGAGCAGATTTCACATCACCCTCCAGTAACTGCTCTCCACGCAACAGATGAGAAGGAAAACATTGAAATGATATGGTGTCAGCGACCTGATCCGAAGTTTAATGGCACATCAGTTGAAGCTAAGGTGCATGGTATACGGCAGCTGAAGCTACTAAATCATGGTGAAACATATGAAATGAATTGCCCTCATCTTTTACTTAGAATTATTCCAGTTACTTCGGCTGATTGGGCTGGCACAGTTACTATACGGTGCCAAGAGACAGGCCTAGTAGCTGAGTTATCTTACAGATCAAGTAATTCCTTTCTAGGGTTTGGGGGGAACCATAGAGTGATCAAAGGAAAGATCCTTGACTCTTCATCATTGAAAGTTCTATATGAAGTTGATGGTCATTGGGATAGCATTGTAAAGTTGAAGGATACAAAAAAGGGGCAAGTAAGAGTAATATATGATGCAAATGAAGTTCTGACAGGTCTAGAAACTCCTATACTCAAGGATTCGGAGAGAGTGTGGCCAACAGAATCAGCCCATGTTTGGGGAAAACTCAGCGAAGCCATTATGAACAAAGACTGGGAGAAAGCAAGAGAAGCAAAGGTAGAAGTGGAAGAAAGACAAAGAGATCTCGTGAAAGAAAGAGAGTCAAAAGGAGAAACATGGATTTCTAAGCATTTTGTAGTATCAAACAATAAAGAGGGGTGGGAATGTTCACCTATTCAAAAGACTGTTCCAGTTGCCCCCATCACAGCACAATAA 1536 0.4141 MIVNQLGSWTIQQRLDSMEGRINCKQFRIREGYGKFLPSYKAWGNRRWGAKSNGQSDGVADMRLGHGAEWDMNDGGHGQIGCCVVLKILSKIPEDFYQTATGHSLPSHTLQYLTFIDFFSLFFFNINMVKMEEDKERKIVLTKPLTIGRESDSDSYKAPNLMQRILSLFKNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCTGSDLLSMCNNGESPMDRFISVVAWSISTSRPVTFGVAPYNPILGETHHVSKGNLNVLLEQISHHPPVTALHATDEKENIEMIWCQRPDPKFNGTSVEAKVHGIRQLKLLNHGETYEMNCPHLLLRIIPVTSADWAGTVTIRCQETGLVAELSYRSSNSFLGFGGNHRVIKGKILDSSSLKVLYEVDGHWDSIVKLKDTKKGQVRVIYDANEVLTGLETPILKDSERVWPTESAHVWGKLSEAIMNKDWEKAREAKVEVEERQRDLVKERESKGETWISKHFVVSNNKEGWECSPIQKTVPVAPITAQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02931 511 Gene3D - 247 421 - -
Spst9g02931 511 Pfam Oxysterol-binding protein 168 495 IPR000648 GO:0008289
Spst9g02931 511 SUPERFAMILY Oxysterol-binding protein-like 163 497 IPR037239 -
Spst9g02931 511 FunFam Oxysterol-binding protein-related protein 4B 432 503 - -
Spst9g02931 511 ProSitePatterns Oxysterol-binding protein family signature. 263 273 IPR018494 -
Spst9g02931 511 Gene3D - 432 505 - -
Spst9g02931 511 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 163 495 IPR000648 GO:0008289
Spst9g02931 511 FunFam Oxysterol-binding protein-related protein 4C 246 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02931 Spst-Chr9 63404032 63411549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02931 K22285 - gmx:100813724 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02931 9 63404032 63411549 Spst9g02931 9 63404032 63411549 ECH
Spst3g03480 3 84607914 84608412 Spst9g02931 9 63404032 63411549 PCT