Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03480 ATGCATTGTTGCAGTACTGTAACAGCGAAGAATACAGATAATGCAGAAGTAAGAGTGATATACAATGCAGAGGAAGTTATATCAGGACTGCAAGCTCCTATTGTCAAGGATATAGAGAGTGTATGGCCAACAGAAACAGGTCTTGTTTGGAGTGAGTTAAGCGAAGCCATCTTAAGCAAAGACTGGGAAAAGGCAAAAGAAGCAAAGAAACGTGTGGAAGAAAGACAAAGGGAGCTTCAAAGAGAAAGAGAATCAAAAGGAGAAAAGTGGGTTCCTAAACACTTTATGTATAACAAAGAAGAGCTTTGGAACTGTTCACCAATTGAAAACTGGGTCCCAAACGCCCCTATCGTCACCTTGTAA 363 0.405 MHCCSTVTAKNTDNAEVRVIYNAEEVISGLQAPIVKDIESVWPTETGLVWSELSEAILSKDWEKAKEAKKRVEERQRELQRERESKGEKWVPKHFMYNKEELWNCSPIENWVPNAPIVTL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03480 120 Coils Coil 62 89 - -
Spst3g03480 120 Gene3D - 42 112 - -
Spst3g03480 120 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 19 103 IPR000648 GO:0008289
Spst3g03480 120 Pfam Oxysterol-binding protein 56 105 IPR000648 GO:0008289
Spst3g03480 120 SUPERFAMILY Oxysterol-binding protein-like 6 116 IPR037239 -
Spst3g03480 120 FunFam Oxysterol-binding protein-related protein 4B 42 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03480 Spst-Chr3 84607914 84608412 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03480 K22285 - gmx:100819769 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03480 3 84607914 84608412 Spst9g02931 9 63404032 63411549 PCT