Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02903 ATGAAAAGAAAAGAAGGGTTTATTATGAACATGTACCATTTGCAACAGCTTCATCATCATCAACCCATGACGAAGATGGATTCTATGAGAAAGAGGGAGAGAAACAAAAGCATGGTGGAGAAAGAGAGGCTTCATGTGATGGACTTGAGTGGCATGGCCTTGGACTCTCTTCCCAAACCTTCTCTTGATTTTGCCACCATTTGCAAGTTGGACTTATCCAACAACAATCTCCAGGACATTCCAGAATCCTTAACTGCGAGACTCCTGAACGTGGAGGTGTTGGATGTTCGTTCCAACCAGCTTAAGTCTCTTCCTAATTCCATTGGTTGTCTCTCTAAGCTTAAGGTTTTGAATGTCTCAGGCAACTTCATCGAATTCCTCCCCAAAACCATTGAGAATTGCAGAGCATTGGAAGAACTGAATGCGAACTTCAACAAGCTGAGCAAGTTACCAGACACAATAGGGTTTGAGCTGATAAACCTGAAGAAGCTCTCAGTGAACTCCAACAAGCTGGTTTTTCTTCCCAGCTCCACCTCACACCTAACATCGTTGAAGGTTCTGGATGCACGCTTGAACTGCCTAAGGGCACTTCCGGAGGACCTTGAGAACCTCATCAACCTTGAGACCCTGAATGTGAGCCAGAACTTCCAGTACTTGGAAACCCTCCCTTATTCTGTAGGGCTCCTCTTGTCCCTGGTTGACCTTGACGTAAGCTACAACAAGATCAAGACCTTGCCTGAATCCATAGGGTGCCTGAAGAACCTCAAGAAGCTAAGTGTTGAAGGGAACCCTCTGGTTTGTCCCCCAATGGAGGTGGTGGAGCAGGGACTGCATGTGGTGATGGAGTTCATGCAGCATAAGATAAACTCGAGCGATCAACACCCAACAACAAAGAAAAGGTGGTGGATGGTGAAGATGGTGAAGTGTGGAGTGAGAAGTGGAAAACGACGAGAGCACGAGGGTTACAACATGCTGAAGCAACAGAGAATGAATGGTTTTGCTTCGCCAGGCTTCATGGGGATGCTCTCTCCTCTTCGTCTCTTCTCATCTCCCCGCCATCCTCGCCATTCTCGCCATTCCATCGGTTGA 1089 0.4702 MKRKEGFIMNMYHLQQLHHHQPMTKMDSMRKRERNKSMVEKERLHVMDLSGMALDSLPKPSLDFATICKLDLSNNNLQDIPESLTARLLNVEVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIEFLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTSLKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETLPYSVGLLLSLVDLDVSYNKIKTLPESIGCLKNLKKLSVEGNPLVCPPMEVVEQGLHVVMEFMQHKINSSDQHPTTKKRWWMVKMVKCGVRSGKRREHEGYNMLKQQRMNGFASPGFMGMLSPLRLFSSPRHPRHSRHSIG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02903 362 Gene3D Ribonuclease Inhibitor 155 309 IPR032675 -
Spst9g02903 362 PANTHER - 48 272 - -
Spst9g02903 362 SMART LRR_bac_2 111 130 - -
Spst9g02903 362 SMART LRR_bac_2 204 225 - -
Spst9g02903 362 SMART LRR_bac_2 229 248 - -
Spst9g02903 362 SMART LRR_bac_2 134 153 - -
Spst9g02903 362 SMART LRR_bac_2 64 83 - -
Spst9g02903 362 SMART LRR_bac_2 88 107 - -
Spst9g02903 362 SMART LRR_bac_2 158 177 - -
Spst9g02903 362 SMART LRR_bac_2 181 200 - -
Spst9g02903 362 ProSiteProfiles Leucine-rich repeat profile. 231 252 IPR001611 GO:0005515
Spst9g02903 362 Pfam Leucine rich repeat 69 122 IPR001611 GO:0005515
Spst9g02903 362 SUPERFAMILY L domain-like 42 270 - -
Spst9g02903 362 SMART LRR_typ_2 229 252 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 88 110 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 111 134 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 64 87 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 158 180 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 135 157 IPR003591 -
Spst9g02903 362 SMART LRR_typ_2 181 204 IPR003591 -
Spst9g02903 362 ProSiteProfiles Leucine-rich repeat profile. 90 111 IPR001611 GO:0005515
Spst9g02903 362 Gene3D Ribonuclease Inhibitor 4 154 IPR032675 -
Spst9g02903 362 ProSiteProfiles Leucine-rich repeat profile. 66 87 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02903 Spst-Chr9 63095755 63098355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02903 39 291 Receptor kinase-like Gene Family AT1G08590 31.579 9.88e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02903 - - gmx:100775711 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02903 9 63095755 63098355 Spst9g02903 9 63095755 63098355 ECH
Spst3g03441 3 84151170 84154662 Spst9g02903 9 63095755 63098355 PCT