Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02880 ATGGTGGTGAAGAAGCCACGGATTGTGATAATTGGAGCTGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCGAAGGACTTGTTTGAGCTGTGCGTTGTGGAGGGTGGAAGCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACATGGATCCATGGAATTGGAGGCAGTCCAATTCACAAAATTGCTCAAGAAATCCACTCACTCCACTCTGACCAACCTTGGGAGTGCATGGATGGGAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTCCATCTCCACCCTTCCATTGTTGACCCCATTACAAAGCTCTTCAACAACCTCATGGAATACTCCCAAGGGAAGCTCAATGAAGCCACTGCAAAGGGTGAACTTGAAAGTTATTACAAGCTGGCTGCTTTGGCTGCTAAGGTTGCTTCCAACAAGTCTAGGAACAGCCTTAGTGTTGGCTCTTTTCTTAGACAAGGCCTTGAGGCTTACCAGATTTCAAAGGAGCAAGAGGAGGTCAAAGGGTGTGGGAACTGGAGCAGGAAGTTACTTGAGGAAGCAATCTTTGCAATGCATGAGAACAACCAGAGGACCTATACATCAGCTGATGACCTTTTGACTCTGGATTATAGTGCTGAAAGTGAGTACATAATGTTCCCAGGTGAAGAAATCACAATTGCTAAAGGGTACTTAAGCATAATTGAGTCCTTAGCTTCTGCGTTGCCACCTGGTTTGGTTCAGTTTGGTAGAAAAGTCACGAGGATTGAGTGGCAGCCTGATGAGAGGAAGGGTGTGGAGAATGGCTGTTATTCTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGATCCGTTATGTCTGCTGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTAAAATCTGCTATTCGGGATGATTCAGGTATGTTCTACCCTCCTCTCCCCCCGTCCAAAACAGAGGCAATTTCAAGGCTTGGTTTTGGGGTTGTTAACAAGTTGTTTATGCAATTAAGTCCAACACATGGAGGAGGGAAACATGAATATCAACATGAACATGTAAATGAAGACTCCAACAAAGGGTTCCCTTTCCTGCAAATGATTTTCCATTCACCTCAATCTGAAACGAGGCAAAAGAAAATACCCTGGTGGATGAGGAAGACAGCCACCCTTTTCCCCATCTACAACAATTCTAGTGTCCTCTTGTCTTGGTTTGTGGGGGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAGGAGATCATAAATGGAGTTTCATCCACAGTCTCGTGCTTTCTACAGCATTCTCAGTGGCAAAAGGGTTCCAGTTCACATAAATTGTGCAATGGGAATGTGAATTCTGATGAGAGATCTCACCAAAATGAGGTGAAGTTCAGTAAAGTCTTGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCAGTAGGGTCAAGTGGTGATGATTTAGATACAATGGCCGAGCCATTGCCAATAGATAGCAGTTGTCAGCCTTCTGCTTCATCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTATAATATCTAG 1716 0.4493 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNNLMEYSQGKLNEATAKGELESYYKLAALAAKVASNKSRNSLSVGSFLRQGLEAYQISKEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLLTLDYSAESEYIMFPGEEITIAKGYLSIIESLASALPPGLVQFGRKVTRIEWQPDERKGVENGCYSSRPVKLHFCDGSVMSADHVIVTVSLGVLKSAIRDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGGKHEYQHEHVNEDSNKGFPFLQMIFHSPQSETRQKKIPWWMRKTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKGSSSHKLCNGNVNSDERSHQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPIDSSCQPSASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02880 571 SUPERFAMILY FAD/NAD(P)-binding domain 3 563 IPR036188 -
Spst9g02880 571 FunFam Putative polyamine oxidase 5 isoform A 504 558 - -
Spst9g02880 571 FunFam Putative polyamine oxidase 5 isoform A 3 116 - -
Spst9g02880 571 Pfam Flavin containing amine oxidoreductase 15 560 IPR002937 GO:0016491
Spst9g02880 571 Gene3D - 94 448 - -
Spst9g02880 571 PANTHER FLAVIN MONOAMINE OXIDASE 6 565 - -
Spst9g02880 571 SUPERFAMILY FAD-linked reductases, C-terminal domain 339 497 - -
Spst9g02880 571 Gene3D - 476 503 - -
Spst9g02880 571 Gene3D - 504 558 IPR036188 -
Spst9g02880 571 Gene3D - 8 337 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02880 Spst-Chr9 62944570 62946285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02880 K12259 - gmx:100783032 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02880 9 62944570 62946285 Spst9g02880 9 62944570 62946285 ECH
Spst3g03411 3 83924560 83926143 Spst9g02880 9 62944570 62946285 PCT