Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03411 ATGGCGGTGAAGAAGGCACGAATTGTGATAATTGGAGCAGGAATGGCAGGCCTCACTGCTGCCAACAAGCTTCACAGTGTGACTGCCTCAAAGGACTTGTTTGAGGTGCGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACTTCTGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGAAGTCCAATTCACAAAATAGCCCAACAAATCCATGCACTTGAGTGTGACCAGCCTTGGGAGTGCATGGATGGGAATGAGAATAAGGCCACCACCATTGCTGAAGGTGGCTTTGTGCTAAACTCTTCATTTGTTCACCCCATCACCAAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAAGATGTCAACAACAACAACAACAACAACCAAGGGTGACAGCGGAAACCTCAGTGTTGGCTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGGGTTCATCAAAAGAGGAAAAGGAGCTCAAAGGGTTTGGAAAGTGGAGTAGGAAGTTGGTTGATGAAGCAATATTTGCCATGCATGAGAACACACAGAGGACTTGTACATCTGTTGCTGACTTGTTAACTTTGGATTATGGCGCAGAAAGTGAATACCAGATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTCAAGCATAATTGAATCGTTAGCATCTGTGCTACCACCTGGTTTAGTTCAGTTGGGTAGAAAAGTCACAAGAATAGAATGGCAACCCGAGAGACACGAGGCGATGAATATGGAAAATGGAACATGTACCAGGCCTGTGGTGCTACACTTCTCTGATGGCTCCATTATGTCTGCGGATCATGTCATTGTCACGGTTTCACTGGGAGTGTTGAAGGCTTCCATTCGGGACGATGATTCAGGTATGTTAATGTTCCATCCCCCTCTACCCTCTTTTAAAGCCGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTCAATAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAAGAAGAGATGAACACTCCAAAGGGTTCCCCTTCTTGCAAATGGTGTTCCATTCACCTCAATCTGTGTTTAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCTACGATTTGTCCTATCTACAACAATTCTAGTGTCCTCTTATCATGGTTTGCTGGGGAAGAAGCTCTGGCACTTGAGTCACTAAAAGATGAAGAGATCATTAAAGGGGTTTCGGACACAATTTCATGCTTCCTGTCACATTCAGTTGAGTACTCTCACGACTATGAGGTGAAATTCAGTGAAGTCTTGAAAAGCAAATGGGGAACAGATCCTTTATTTTTAGGTTCGTACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATACAATGGCAGAACCTTTGCCAAAACGTAGCAGTAGCCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTCCAACATTATGCGCTGTGTTAA 1584 0.4501 MAVKKARIVIIGAGMAGLTAANKLHSVTASKDLFEVRVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQQIHALECDQPWECMDGNENKATTIAEGGFVLNSSFVHPITKLFNNLMDHAQGKMSTTTTTTTKGDSGNLSVGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLVDEAIFAMHENTQRTCTSVADLLTLDYGAESEYQMFPGEEITIAKGYSSIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNMENGTCTRPVVLHFSDGSIMSADHVIVTVSLGVLKASIRDDDSGMLMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRRDEHSKGFPFLQMVFHSPQSVFRHKKIPWWMRRTATICPIYNNSSVLLSWFAGEEALALESLKDEEIIKGVSDTISCFLSHSVEYSHDYEVKFSEVLKSKWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKRSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYALC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03411 527 PANTHER FLAVIN MONOAMINE OXIDASE 7 524 - -
Spst3g03411 527 FunFam Putative polyamine oxidase 5 isoform A 465 519 - -
Spst3g03411 527 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 458 - -
Spst3g03411 527 SUPERFAMILY FAD/NAD(P)-binding domain 1 524 IPR036188 -
Spst3g03411 527 Gene3D - 8 519 IPR036188 -
Spst3g03411 527 Gene3D - 94 464 - -
Spst3g03411 527 Pfam Flavin containing amine oxidoreductase 15 521 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03411 Spst-Chr3 83924560 83926143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03411 K12259 - gmx:100809633 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03411 3 83924560 83926143 Spst3g03411 3 83924560 83926143 ECH
Spst3g03411 3 83924560 83926143 Spst9g02880 9 62944570 62946285 PCT