Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02871 ATGGTTTTTCTCTGCCTATCTACCATTGTGTTCACACAAGCAAAATTCCAATTTCCCAAAGAAATAGCCTCAAAGCTTAGTAGTGATCCTCAGATCCTTTCATTAGCCTCAACAGATTATGGTGACATAGTTCACCTAACCCCATTGGCAGTTTTCGAGCCATCTTCCATAAGTGATATCTCAAATTTGATAAATTTCTCAAACTCTCTTTCCACTCCTTTCACCATAGCCACCAGAGGTAATGGTCACTCGATTCTTGGCCAAGCTATGACATCAAATGGGGTGGTGCTGAACATGACGAACCTCAATGAGTCACCAATTTTGGTTTCAGATTGTGATGGGAAGAGTCCATTGAATTGTTATGCTGATGTTGGTGGTGAAATATTGTGGATTGATGTGCTGCATGCAACCCTTGAACGAGGACTCACACCTCTATCTTGGACTGATTATCTGTATTTAACTGTTGGGGGCACTCTCTCAAACGCTGGAATCAGTGGTCAAACCTTTAGATTTGGTCCTCAGATCTCTAATGTTCTTGAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGAGTTGCTCTAGGGAGAAGAACTCAGAATTATTTTATGGTGCTCTTGGAGGATTAGGTCAATTTGGGGTGAAATGGCTCCATCTGCTTTACACCAACTTCACTGCATTTTCTAGAGATCAAGAACATTTAATCTGTTTCAGTGAAAAGAACGACACTACTGCATCAGATTATGTAGAAGGCAAGCTTCTATTGAATCAGCCACCACTGGATCTTTCCTTTTATCCAGATTCTAATCATCAAAGGATAACTTCACTAGTAACTCAGAATGGCATTATCTACATCATAGAGCTTGTCAAATACTATGACAACAACTCTCAAGCACGTGTCCAGAAGGATGTGGCAGATTTGGTGAAAGGGTTAAGTTTCGTACCAACGTTTATCTTCGAAAAAGATGCAACATACGAGGAGTTTCTGAACAGAGTTCAGGCAGATGAGCTGTTTCTAAGGTCAAAAGGACTTTGGGAAGTTACTCATCCTTGGTTGAACATCTGGATTCCAAGATCTCGAATCTTGGATTTTAACGAAGGTGTCTTCAAGAACATTATTCTTAAGCAGAACATTTCTAGTGGAATTTCTTTGGTCTACCCAATTAATCGAAACAAGTGGGATGATAAGATGTCACCAGTATACACCAGAGGAAGATGTTTTCTACGCTGTAAGTTTTCTGCGTACTGCAGATTCCTTAGATATGGTGGAGAAATTTCAGGCTCAAAACCAACAAATATTAGAGTTTTGCAAGCGTGCTGGTATTAA 1326 0.4012 MVFLCLSTIVFTQAKFQFPKEIASKLSSDPQILSLASTDYGDIVHLTPLAVFEPSSISDISNLINFSNSLSTPFTIATRGNGHSILGQAMTSNGVVLNMTNLNESPILVSDCDGKSPLNCYADVGGEILWIDVLHATLERGLTPLSWTDYLYLTVGGTLSNAGISGQTFRFGPQISNVLELDVVTGKGDLVSCSREKNSELFYGALGGLGQFGVKWLHLLYTNFTAFSRDQEHLICFSEKNDTTASDYVEGKLLLNQPPLDLSFYPDSNHQRITSLVTQNGIIYIIELVKYYDNNSQARVQKDVADLVKGLSFVPTFIFEKDATYEEFLNRVQADELFLRSKGLWEVTHPWLNIWIPRSRILDFNEGVFKNIILKQNISSGISLVYPINRNKWDDKMSPVYTRGRCFLRCKFSAYCRFLRYGGEISGSKPTNIRVLQACWY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02871 441 PANTHER GULONOLACTONE OXIDASE 16 400 - -
Spst9g02871 441 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 214 410 IPR015345 GO:0009690|GO:0019139|GO:0050660
Spst9g02871 441 Gene3D - 29 98 IPR016167 -
Spst9g02871 441 SUPERFAMILY FAD-binding/transporter-associated domain-like 26 214 IPR036318 GO:0050660
Spst9g02871 441 Gene3D - 214 412 IPR016170 -
Spst9g02871 441 Pfam FAD binding domain 48 194 IPR006094 GO:0050660
Spst9g02871 441 ProSiteProfiles PCMH-type FAD-binding domain profile. 44 219 IPR016166 GO:0071949
Spst9g02871 441 Gene3D - 99 213 IPR016169 -
Spst9g02871 441 SUPERFAMILY FAD-linked oxidases, C-terminal domain 214 409 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02871 Spst-Chr9 62894264 62897977 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02871 K00279 - gmx:100793158 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03405 3 83830163 83833515 Spst9g02871 9 62894264 62897977 PCT