Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02823 ATGGTTCAATCCAAAACCACTCCTAAACCCAATGCCATTCACCCCCTCACTCCCGCCCAAACCCGCGAACCTTCCTCTCTTTCCCCGTCACCCCCTCTCCGCCGTCGCAGCCTCCGTCTTGCCTCCGTCTCCTGCTCCTCCATCCCCGCAATCCCCGATCCCGCTGTTAGGGTTTCTGCCACCAACAGCAACCCAACTGGTCAGACCTTCCTTAACTTAAGATCAGGAAAGAAGGTTCTCAAGAGAGCGATGACAGATGATGCAGCAGAGGAGCAAGGTAATAAAGCAAACTTTGGTGCTGATGATGTTGCGGTGACAGTGCATGCCAATGTCATAGCAGGAGTATCCAAAACGGAAAACTCAGCCGTCAATGTCAATATTGTAGCAGATGATTCTGACTGTAGGGTTTCTACCCGGAAACGCAAGAGTGACTCAACTGTTTCTCATCCCAAGGAGTGTCTCAACTTAAGATCGAAAAAGAAGGCGCTCAAGAGAACTGTGACTGGTTCAGAAGAACAAGTCAATGATGTAGATGGTGAAAAGAAGATTATTAAGAGAACAGTGACTAAATATTCAGAAGAACAAGTTAATGATGCAGATGAAGATGACGGTGATGTGGAAGTGGGGGTTGATGGAGAAGTGACCATACCGGAATCCAGTACGGAGAACTTGGGTGTGGATGATGAATCTTCACGAGTTCCAGAACTTGCTAGTGCTAGAAACTCCAATGCAAGGGAACGTGTTTCTGGTTCGTGGAGGAACAATTTTATGGAGCGCTTCCACGACATTGCACGGGAAAACGCATCCCGGTTCGCTTTATTTGCACAGGAAGAGGAAGTCGATGATCAGTCACATCCTGTTCCTGAAGACGAAATTGAGGACTGGCCCTGGCCCGGTCCTTTCTCTACTGCCATGAAAATCATCAGGGGTCGAGGGACGAATCTGCAAAAGGATCAAACAAGTTCACAGACTAACTTATGTGAGTCCATTAAGTGGGTTCCCAAGACAAAGAAAGGGAATGTAGGCGACTGTTCGGTTACTTCGTTGCAAGATATGTGCCTTCAGATTCTTGTGAAGAACGTTGATGCGATTGCTTCGCTCGAGAATGTGCCTGATGCGCTAAGGCACCGGCTTAGCCAGTTGCTCTGTGATTCAAGGAAAATCAACAGTCACTTTCTTGAGCTTCTTGTGGGTGGAACTCCCTCAGATATTCGATTAAGAGATTGCTCGTGGTTGACCGAGGAACAGTTCATAGAGTGTTTTCAAAATTGTGACACGGAAAATTTGTTGGTACTGCAACTTGACCAGTGTGGGCGATGTTTGCCTGATTATGTAATAGCTGCTACTTTGGCACAGACACCAAGGCATTTAGTTAGATTAACTACTTTATCACTCAGTGGTGCATGCCGACTTTCAGATGGAGGTTTGCGGGCACTTGTTTCTGCAGCTCCAGCACTTAGATCAATAAATCTCAGCCAGTGCTCCCTTCTGACATCTGCTAGCATATATATTTTGGCTGAATCATTAAGATCTCTTCTGAAAGAGTTGTACCTTGATGATTGCCAAGGCATTGATGCTGCACTAATTGTACCAGCACTGATTGAGCTTGAACACTTAGAAGTGTTGTCAGTAGCTGGTATTCAAACTGTTGGTGATGAATTTGTCAAGAATTACATTGTTGCACGTGGACAAAACATGAAAGAGCTTGTTTTGAAGGACTGCATAAATCTGACCGATGCATCAATCAAAGTTATTGTCGAGCACTGTCCAGGATTACGGGTGCTTGATCTTATGAACCTGAACAGATTAACAGATTCATCCGTGGGATATCTTACCAATGGTTGTTGTGCACTTGATACGCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACCACTGGAGGGTCCCTTAAGGAACTGTCTCTTAATAACATTAAGAAGGTTGGTTACCACACAACCATAGCACTTGCAAACCATGCAAAAAGTTTGCATTCTCTGGATCTATCTTGGTGCAGAAATTTGACAGACAATGCACTGGGTTTGATTGTGGATAGCTGCTTGGCCCTGAGATTACTCAAACTTTTTGGATGCACTCAGATAACAGATGCATTTCTTAATGGCCACTCAAACCTACAGCTACAGATAATTGGTTTGAAAATGTCTCCTGTCTTGCAACATGTCAAAGTTCCAGATCCTCATCAGGGTGCTTTGAATTATTCTTCAGTCTCCTTAGATTTTGTATGCAATTAG 2271 0.4483 MVQSKTTPKPNAIHPLTPAQTREPSSLSPSPPLRRRSLRLASVSCSSIPAIPDPAVRVSATNSNPTGQTFLNLRSGKKVLKRAMTDDAAEEQGNKANFGADDVAVTVHANVIAGVSKTENSAVNVNIVADDSDCRVSTRKRKSDSTVSHPKECLNLRSKKKALKRTVTGSEEQVNDVDGEKKIIKRTVTKYSEEQVNDADEDDGDVEVGVDGEVTIPESSTENLGVDDESSRVPELASARNSNARERVSGSWRNNFMERFHDIARENASRFALFAQEEEVDDQSHPVPEDEIEDWPWPGPFSTAMKIIRGRGTNLQKDQTSSQTNLCESIKWVPKTKKGNVGDCSVTSLQDMCLQILVKNVDAIASLENVPDALRHRLSQLLCDSRKINSHFLELLVGGTPSDIRLRDCSWLTEEQFIECFQNCDTENLLVLQLDQCGRCLPDYVIAATLAQTPRHLVRLTTLSLSGACRLSDGGLRALVSAAPALRSINLSQCSLLTSASIYILAESLRSLLKELYLDDCQGIDAALIVPALIELEHLEVLSVAGIQTVGDEFVKNYIVARGQNMKELVLKDCINLTDASIKVIVEHCPGLRVLDLMNLNRLTDSSVGYLTNGCCALDTLKLCRNPFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTTIALANHAKSLHSLDLSWCRNLTDNALGLIVDSCLALRLLKLFGCTQITDAFLNGHSNLQLQIIGLKMSPVLQHVKVPDPHQGALNYSSVSLDFVCN 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02823 756 MobiDBLite consensus disorder prediction 213 242 - -
Spst9g02823 756 Gene3D Ribonuclease Inhibitor 560 632 IPR032675 -
Spst9g02823 756 SMART LRR_CC_2 641 666 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 457 482 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 667 692 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 589 614 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 615 639 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 563 588 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 693 718 IPR006553 -
Spst9g02823 756 SMART LRR_CC_2 483 508 IPR006553 -
Spst9g02823 756 SUPERFAMILY RNI-like 403 712 - -
Spst9g02823 756 Gene3D Ribonuclease Inhibitor 325 559 IPR032675 -
Spst9g02823 756 MobiDBLite consensus disorder prediction 1 32 - -
Spst9g02823 756 FunFam RNI-like superfamily protein 340 557 - -
Spst9g02823 756 Gene3D Ribonuclease Inhibitor 633 736 IPR032675 -
Spst9g02823 756 MobiDBLite consensus disorder prediction 1 35 - -
Spst9g02823 756 FunFam F-box/LRR protein 562 739 - -
Spst9g02823 756 PANTHER UNCHARACTERIZED 344 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02823 Spst-Chr9 62465407 62470142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02823 K15082 - gmx:100808150 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02823 9 62465407 62470142 Spst9g02823 9 62465407 62470142 ECH
Spst3g02751 3 77069090 77072521 Spst9g02823 9 62465407 62470142 PCT