Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02751 ATGACCAACACTCATCCAATTCCGGATTCTGATCCTCCAAACCTCGATGGGGATTCCGATTCTGACATTGACGCCCTTATCAATGCTCTTTTGGAACCTAACCCCCAATCCTCCCTTCTTGATCACCTCCACGGATCCACCTCTGACGTCAAAGAATCATCCCTCAAGAGAGGATTCCACGCCGATGATTCTTCCCACACTCAAATTCCCCTCAAACGCGGTCGTATTCACAATGTCACACACCACCATGATCATCTCCACGCCGCCTTTCAAATTCAAAACCCTACCCTTCCTCCTCCTCCTCCTCCTCTTCCTCTCTCCCAGCCCCTGCCGCCTGCAGCTATCAATGGAGTCTCTCAAGCCGTCGAAGGGCCAAGGAAACGCCCCGTGTTTGACTCCGATTTTCTATCCAGAGCTCTCCGTGAAGCTGAATCTGTCTTTCCGGAGGATTCAGCCGATAACGGCGTTAACTTTGACGGCGAGCCTGGGAATTTTAAAGGACCTTATCTATCGCTTAATGATTATCGGAGGATTCGGAACATGGAACGTTTCCGACAGATAGCCAAGGAAAGCGCCACTCACTATGCTCGATTCACCTCGGAGGAGACCCCAGACGAAAGGCCGTCGTCTTCTACTGCGCCTCTGGAAATCGATGATTCCACATCTCCGTTTTCGATCTCTGTGAAGGCCATCAAAGAGCGAGCGGCGAAAAAGAAGGGGCGTGATGCATGGGTTGCGAAGAATCAACAAAGGGAGAAAAGGGTCTTGGTTCCCTCTTTGCAAGAACTGTGTCTCAAAATTCTGGCGGATAATGCCGATGCCATGGTTTCTCTTGAGGGTGTTCCGGATGAGTTGAGGCACAAGCTGTGCAAACTTCTATGTGACTCGAGAAAGATGAACAATCACTTTCTGGAACTTCTTCTCAGTGGGTCTCCCACGGAGATTCGCCTCGGAGATTGCTCGTGGTTGACGGAGGAACAGTTCGCCAAATGTTTTCATTCGTGTGACACTGGAAGATTGGAGGTGCTGCAACTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGATAGACGGTCACAAAGGTGGTTGCCGAGACTAATTAGTCTGTCCCTAAGTGGTGCATGCCGTCTCTCAGACAAGGGGTTGCAAATGCTAGTTTCTTCTGCCCCAGTACTAAGATCAATTAATTTAAGCCAGTGCTCCCTTCTCTCATCTTTCAGTGTTACTATTTTGGCCCATTCGTTGGGATCTCTATTGAAAGAGTTATATCTTGATGATTGCCTAACTATCGATGCTGCACAAATTGTGCCGGGATTGAAGAAACTTGAACATTTAGAAGTCTTGTCATTGGCTGGCATTCAAACTGTCTCTGATGAGTTTATCCGGGATTACATCACTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTAGAAAATTAACCAATGCATCAATAAAAGTCATTGCTGAGCACTGTCCTGGGTTGTTTGCACTCGATCTTATGTATTTGGACAACTTGACGGATTTATCCATGGGATATCTTACAAATAGCTGTCGAGTACTTCATACATTGAAACTCTGCCGTAATCCATTCAGTGATGAAGCAATTGCCGCATTTTTGGAGATTGCTGGAGATTCTTTAAAAGAACTTTCTCTTAATAATATTAAGGAGGTTGGGCACCATACAGCCTTATCACTTGCTAGTCATGCAAAAAATTTGCATAGTCTAGATCTGTCTTGGTGCCGAAATATGACAGACAATGAGTTGGGTTTGATTGTGGATAGCTGCTTCTCACTGAGGTTGCTTAAACTGTTTGGATGCTCACTGGTAACAGATGCTTTTCTGAATGGGCACTCAAACCCAGAGATTCAGATCCTTGGATTGAAGATGTCTCCTTTATTGCAAAATGTCAGAGTGTCTAATACCTGTCAAGGTCCTTTGCGTTATTCACCAGTCTCGGTAGATTTGATATATATAGATGAGAATTAA 2007 0.4564 MTNTHPIPDSDPPNLDGDSDSDIDALINALLEPNPQSSLLDHLHGSTSDVKESSLKRGFHADDSSHTQIPLKRGRIHNVTHHHDHLHAAFQIQNPTLPPPPPPLPLSQPLPPAAINGVSQAVEGPRKRPVFDSDFLSRALREAESVFPEDSADNGVNFDGEPGNFKGPYLSLNDYRRIRNMERFRQIAKESATHYARFTSEETPDERPSSSTAPLEIDDSTSPFSISVKAIKERAAKKKGRDAWVAKNQQREKRVLVPSLQELCLKILADNADAMVSLEGVPDELRHKLCKLLCDSRKMNNHFLELLLSGSPTEIRLGDCSWLTEEQFAKCFHSCDTGRLEVLQLDQCGRCIPDYALLDRRSQRWLPRLISLSLSGACRLSDKGLQMLVSSAPVLRSINLSQCSLLSSFSVTILAHSLGSLLKELYLDDCLTIDAAQIVPGLKKLEHLEVLSLAGIQTVSDEFIRDYITARGHNMKELVLKDCRKLTNASIKVIAEHCPGLFALDLMYLDNLTDLSMGYLTNSCRVLHTLKLCRNPFSDEAIAAFLEIAGDSLKELSLNNIKEVGHHTALSLASHAKNLHSLDLSWCRNMTDNELGLIVDSCFSLRLLKLFGCSLVTDAFLNGHSNPEIQILGLKMSPLLQNVRVSNTCQGPLRYSPVSVDLIYIDEN 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02751 668 SMART LRR_CC_2 366 391 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 472 497 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 524 548 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 498 523 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 392 417 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 602 623 IPR006553 -
Spst3g02751 668 SMART LRR_CC_2 576 601 IPR006553 -
Spst3g02751 668 Gene3D Ribonuclease Inhibitor 545 654 IPR032675 -
Spst3g02751 668 Gene3D Ribonuclease Inhibitor 438 544 IPR032675 -
Spst3g02751 668 PANTHER UNCHARACTERIZED 258 445 - -
Spst3g02751 668 MobiDBLite consensus disorder prediction 205 220 - -
Spst3g02751 668 MobiDBLite consensus disorder prediction 195 220 - -
Spst3g02751 668 Gene3D Ribonuclease Inhibitor 253 436 IPR032675 -
Spst3g02751 668 FunFam RNI-like superfamily protein 250 466 - -
Spst3g02751 668 FunFam DNA repair protein rhp7 isoform A 552 650 - -
Spst3g02751 668 MobiDBLite consensus disorder prediction 1 24 - -
Spst3g02751 668 SUPERFAMILY RNI-like 315 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02751 Spst-Chr3 77069090 77072521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02751 K15082 - gmx:100798274 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02751 3 77069090 77072521 Spst3g02751 3 77069090 77072521 ECH
Spst3g02751 3 77069090 77072521 Spst9g02823 9 62465407 62470142 PCT