Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02758 ATGCAATTGGATTCTTCATCTTGCACTCCTGTATATAACCCAACAAAGGTCACTGATTTATGCAAGTTCATACAAGTTGCTCTTCTGAACAAACTCATGGAAGAAGTTAATGTGGTTCAAACCAAAGATGGAACTGTTACAGTAGCTTCTGTGTTTCCTGGTCATCAAGAAGCTATACAGCAGAGAGACCACAAATTCTTAAGAATTGCTGTTGAAGAAGCTTATAAAGGGATAGAGTGTGAAGATGGTGGTCCTTTTGGTGTTGTCGTAGTTCGTAACGATGAAATAGTTGCTTGCTGTCACAACATGGTGCTAAGGAACACAGACCCTACTGCTCATGCAGAAGTCACTGCAATAAGAAAGGCTTGTGAAAATCTAAACAAGATAGAACTTTCAGAGTGTGAGATGTATGCTTCTTGCGAACCTTGCCCAATGTGCTTTGGAGCAATCCACCTCTCACGAGTTAAGAGGTTGGTTTATGGAGCAAAAGCAGAGGCAGCAATTGCTGTTGGGTTTGATGACTTCATTTCAGATGCATTGAGAGGCACTGGATTCTATCAGAAAGCGCAATTGGAGATTAAAAGGGTTGAAGGCAAAGAGGGTAACATTGCTGAAGAAGTTTTTGAGAAAACAAAGGAAAAGTTTCGAATGTTTTGA 657 0.4049 MQLDSSSCTPVYNPTKVTDLCKFIQVALLNKLMEEVNVVQTKDGTVTVASVFPGHQEAIQQRDHKFLRIAVEEAYKGIECEDGGPFGVVVVRNDEIVACCHNMVLRNTDPTAHAEVTAIRKACENLNKIELSECEMYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAVGFDDFISDALRGTGFYQKAQLEIKRVEGKEGNIAEEVFEKTKEKFRMF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02758 218 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 62 161 IPR002125 -
Spst9g02758 218 Gene3D Cytidine Deaminase, domain 2 54 217 - -
Spst9g02758 218 FunFam tRNA-specific adenosine deaminase 61 217 - -
Spst9g02758 218 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 56 165 - -
Spst9g02758 218 SUPERFAMILY Cytidine deaminase-like 56 177 IPR016193 GO:0003824
Spst9g02758 218 CDD nucleoside_deaminase 67 174 - -
Spst9g02758 218 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 61 171 IPR002125 -
Spst9g02758 218 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 113 150 IPR016192 GO:0008270|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02758 Spst-Chr9 61824289 61825784 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02758 - - gmx:100527067 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02845 3 77982683 77984713 Spst9g02758 9 61824289 61825784 PCT