Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02578 ATGAAGAAGGCTTTGGGGTTGTCAAAATTTCTTGGTGATTTTAAGGGACTAGATGGAGCAATTGTTAAGGCAACAAACTATAAGCATGCATTACCAAAGGAAAAACACGTTCGTACCATTTTTCTATCACTTTCTCCATCAAAACCTCGGAACGAGGTGATTTACTGTATTCATGGTGTGACCAAGCGTTTTAGCCAAACTAATAACTGGGCTGTTGCCATGAAAACACTTATAGTCATACATCGTGCCATGAGGGAACTCGATTCCACACTTTGGGAAGAGCTTGTACACTATAGACATGTAAGGGGTCACATGATTGACTTATCATACTTTCATGAAAAATCAGTCCCCAATGATTATTCTATTTGGATCCGTAGTTATGTCCTCTACTTAGAAGAGCGTCTAAAATGTTTTGCTCTTGTGAATTACGACGTTGCAACAAATAGTTCGAAATATTCGCAAAAGCTTGACACCCAAGAGTTGTTGGAGCAATTGCCAGCCCTACAAAATCTTCTCTCTCGACTTCTTGATTGCAAGCCAAGGGGTGTAGCTGCAAATAATCGCTTAATTCAATTTGCGCTTTCACTCGTGGCTGGTGAAAGTGTCAAGTTATACGTTGCAATTACTATTAGAGTGGTCGAATTACTTGACAAGTTTTTCGAGATGTACAAGAACGATGCTATTAGGTCACTTCAAATTTACAAAAAATCAGTGACTCAGCCTCCTACTTCTTTTATTATTACCATGGAAGAATATATTAAGGAGGCTCCAAGTTCCTTAATGCTTGAATACAACATGGACGTGAAAAGGGAAGGAATTATTGAGCACAAAAATGCAGGTTCAGCGGGTGATTTTATGATGATAGAAAACAATGCTGATAAGTCAACAAATCCTTCTGCTGAAAATAACATGCCTACACCACCACAAGCTGCTGAACTTATGGGTTTGTATGACTTACTAACAGGAGCATCTGAATTTGATGAGAAATCTCTAGCAACAACAATTATCGCAACTGAAAACAATTTAAACTCCACCGATGATGAGAATGAGACCAATCCAGTACTAGGATGGGAGGTTGCTCTTTTTGCTGACTTAGAAAGTAATAAGGAGAATGTAGTAACTGACATTGAGGGAAAAGAGAAGATTGGTGGAATGGAGTTGTGGAAACATTTTGACGAGAAAAATGGTGGTGACACTCAACAAAGTGTAACTCACGATACGAGCCAAGTAACGTGGAATCCTTTTGACTTTGAGGGTAGTCATAGTGACCAATTTAGCGTGGAAGTGGCGTTCCCAACCTCACAGAATGAATTTTGTGCATTTCCAAACATGTCATCCCCAATTCCAGCTGAAATGGTGGTGGACATGCCCTACCAACATTCGTTGCAGCAACAACATGAACCTTCTTATTCTTCAAATAAAAAATCGATCAATCCTTTCGATGAAACACAACCAACTCAAAAACCTGAACATGATTCATCAGATACACTTCTTGTTTCTGGGATTCTGTCTCTTCAAGGCTCAGACCAATTTGTTAGCTTGCTGTTCTTTATCTCTCCTCAGTTTGAATCATCTGATGAGAGATTCCTGTCTTCAGCTTTATCTTGGGAGCTGTCCTACTTTCTATTCAGACATTCTGTCCCTTTCTCTGTTCTCTGTCCTACTGAAGCTGAGGCAGCTGAATATGGTGAGGATTGTAGCTGTCAGGGCCTACTGGATCGAAGAATACAGTCTTTGACACAAGAATCTTCTTCCTCAGGCAAATGGGTTTTCTTAGCTAACTGTCAAGGATGCCATAGTGACGGCTCAATCTGTCTGGTTTATCATTATGATCTCAGGTCCTTGAGTGGTCTTTTGGGTTTTGGTAATTTTGTTTTCTGCATCTTGAAGCCAATCCTGGGAAAGAAAAAGTTTGGAACAAGATTTCAACATTGGGTTTCTACAGATGGTGAAGCAGCACCCAGTGCTGTAACTTTTGGGTCAGTGATCTTTTAA 1995 0.3995 MKKALGLSKFLGDFKGLDGAIVKATNYKHALPKEKHVRTIFLSLSPSKPRNEVIYCIHGVTKRFSQTNNWAVAMKTLIVIHRAMRELDSTLWEELVHYRHVRGHMIDLSYFHEKSVPNDYSIWIRSYVLYLEERLKCFALVNYDVATNSSKYSQKLDTQELLEQLPALQNLLSRLLDCKPRGVAANNRLIQFALSLVAGESVKLYVAITIRVVELLDKFFEMYKNDAIRSLQIYKKSVTQPPTSFIITMEEYIKEAPSSLMLEYNMDVKREGIIEHKNAGSAGDFMMIENNADKSTNPSAENNMPTPPQAAELMGLYDLLTGASEFDEKSLATTIIATENNLNSTDDENETNPVLGWEVALFADLESNKENVVTDIEGKEKIGGMELWKHFDEKNGGDTQQSVTHDTSQVTWNPFDFEGSHSDQFSVEVAFPTSQNEFCAFPNMSSPIPAEMVVDMPYQHSLQQQHEPSYSSNKKSINPFDETQPTQKPEHDSSDTLLVSGILSLQGSDQFVSLLFFISPQFESSDERFLSSALSWELSYFLFRHSVPFSVLCPTEAEAAEYGEDCSCQGLLDRRIQSLTQESSSSGKWVFLANCQGCHSDGSICLVYHYDLRSLSGLLGFGNFVFCILKPILGKKKFGTRFQHWVSTDGEAAPSAVTFGSVIF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02578 664 MobiDBLite consensus disorder prediction 463 494 - -
Spst9g02578 664 CDD ANTH_N 17 138 - -
Spst9g02578 664 Gene3D - 1 144 IPR008942 -
Spst9g02578 664 ProSiteProfiles ENTH domain profile. 9 145 IPR013809 -
Spst9g02578 664 Gene3D ANTH domain 145 255 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Spst9g02578 664 SUPERFAMILY GAT-like domain 152 255 - -
Spst9g02578 664 SUPERFAMILY ENTH/VHS domain 16 144 IPR008942 -
Spst9g02578 664 SMART enth_2 15 145 IPR013809 -
Spst9g02578 664 Pfam ANTH domain 17 240 IPR011417 GO:0005543
Spst9g02578 664 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 463 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02578 Spst-Chr9 59742894 59753825 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02578 K20043 - qsa:O6P43_022247 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04987 3 101652637 101657498 Spst9g02578 9 59742894 59753825 PCT