Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02549 ATGAAATTCGGAAAGAGCCTGAACAACCAGATCGAGAAAACACTACCCCAATGGCGCGACAAGTTCCTATCGTATAAGGAATTGAAGAAGAAATTGAAACTTGTCGAGCCCAAACACACCGAGCAACGCTCCACCAAACGCCCAAGGCTCGATGCAGACATGTCCAAGGAGGAAACAGACTTCAGGAACTCACTCGAAGAAGAACTCCACAAATTCAACACCTTCTTTGAGGAGAAAGAGGAAGAGTGCATCATCAAATTGAAGGAGCTACAAGATAGGGTGGGCAAAGTAAAAGATTCTAATGAGCAATTAATGGAAATTCGCAAGGAGATTGTTGATTTCCATGGAGAGATGGTCTTGCTCGAAAACTATAGTGCTCTGAACTACACAGGACTAGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCGTTTCATTCAGAAGGTCTTGCAACAGCCTTTCTTCACCACTGATCTGCTCTACAAACTTGTGAAGGAGTGTGAAACAATGCTGGACCACCTTTTCCCGGTGAATGATCCTTCTATTTGTGGGGAGGCAACAACTCCCCAAGCTGAGGGGTGTGATGCTTCAACTGCAAGCAGCAGTAAGAGTGATGATCTGCTGATGCCAAAGGATTTAGCAGCCAACCAGCACCACCACATTGAGAGCCTCTATATGAAGAGTACCATCACAGCTTTACATGTTTTGCAGGAAATTAGAAAGGGAAGTTCAACGATAAGCATGTTTTCATTGCCACCGTTGCAGATGAGTGGCTTGGAAGAAACATGA 807 0.4436 MKFGKSLNNQIEKTLPQWRDKFLSYKELKKKLKLVEPKHTEQRSTKRPRLDADMSKEETDFRNSLEEELHKFNTFFEEKEEECIIKLKELQDRVGKVKDSNEQLMEIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLRFIQKVLQQPFFTTDLLYKLVKECETMLDHLFPVNDPSICGEATTPQAEGCDASTASSSKSDDLLMPKDLAANQHHHIESLYMKSTITALHVLQEIRKGSSTISMFSLPPLQMSGLEET 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02549 268 Coils Coil 87 107 - -
Spst9g02549 268 CDD SPX_AtSPX1_like 2 142 - -
Spst9g02549 268 ProSiteProfiles SPX domain profile. 1 153 IPR004331 -
Spst9g02549 268 MobiDBLite consensus disorder prediction 36 57 - -
Spst9g02549 268 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 266 IPR031142 GO:0016036
Spst9g02549 268 Pfam SPX domain 106 155 IPR004331 -
Spst9g02549 268 Pfam SPX domain 1 39 IPR004331 -
Spst9g02549 268 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02549 Spst-Chr9 59370963 59372401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02549 - - gmx:100790400 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02549 9 59370963 59372401 Spst9g02549 9 59370963 59372401 ECH
Spst3g04935 3 101019913 101022234 Spst9g02549 9 59370963 59372401 PCT