Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04935 ATGAAATTCGGAAAGAGCCTCAGCAGCCAGATCGAGAAGACTCTGCCGGAGTGGCGCGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAACTCAAGCAATTCGACCCTCCGGCCGTGGCCGAAGAACGCCCCGGAAAACGCCTCAAGCCTGATGCCGCCGCCGACATGACCAAGGAGGAGATCGACTTCCGCAACTTGCTAGAGAATGAACTCGACAAATTCAACACCTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAGACTCAAGGAGTTACAAGATAGGGTGGCCAAAGTTAAGGATTATAGTGAAGAGATGATGAAAATCCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTTAACTATACAGGGCTAGTGAAAATACTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATCCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACAGACTTGCTCTACAAACTTGTAAAAGAGTGTGAAACAATGCTGGACCGCCTTTTCCCTGTTAATGATCCTCCTCCAGTTTCTGGTGAGACAACTCCCCAAGCTGAAGGTTGTGATCCTTCAACTTCAACCACTACCAAGAGTGATGGTGGTTTGCTGATTCCCAAGGAATTATCTGAGATTGAGTACATGGAGAGCCTTTATATGAAGAGTACCGTATCAGCTTTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACTGTTAGCATGTTTTCATTGCCACCGTTGAAGATAAATGGTTCAGAAGAAACATGGAAGAAAATCCCGGTTCTTGAACAAGCAGCCAAGTAA 849 0.457 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAVAEERPGKRLKPDAAADMTKEEIDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDRVAKVKDYSEEMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDRLFPVNDPPPVSGETTPQAEGCDPSTSTTTKSDGGLLIPKELSEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKINGSEETWKKIPVLEQAAK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04935 282 CDD SPX_AtSPX1_like 2 145 - -
Spst3g04935 282 MobiDBLite consensus disorder prediction 199 215 - -
Spst3g04935 282 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 269 IPR031142 GO:0016036
Spst3g04935 282 MobiDBLite consensus disorder prediction 187 216 - -
Spst3g04935 282 Pfam SPX domain 106 158 IPR004331 -
Spst3g04935 282 Pfam SPX domain 1 35 IPR004331 -
Spst3g04935 282 ProSiteProfiles SPX domain profile. 1 156 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04935 Spst-Chr3 101019913 101022234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04935 - - gmx:100787780 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04935 3 101019913 101022234 Spst3g04935 3 101019913 101022234 ECH
Spst3g04935 3 101019913 101022234 Spst9g02549 9 59370963 59372401 PCT