Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02522 ATGACTCACCATCTGGTTCACAACCTGTTCTTCAACTACTTCTCTAAGGACATCAAAACTTTTGCTTGCGTCATACTTCTATCATCGTTTACTCTCCCACAAGGAAACATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGCTTGCCAGCACATAAATTTCAAGAAGAGGGATTCATGCCAAAGTTGTGGATACCCCAAATTTGGAGGCTCTGACCCAACAACTTACAGATACAACTGGACTGAAGCCTTGGCAGGGGACTGGTACTGCACTGCTATGAACTGTGGAGCTCACAACTATGCCAGCAGATCAAGCTGCTATAGATGTGGTGCATTGAAAGATGGTTATTCTTGTGGATTTGGGGGAAACATGGATGCCTCTGGAGGATATGTTTCTGATTGCAATTATCCCCCAGGTTGGAAAACTGGTGACTGGATTTGCACTAGAATTGGTTGTGGAGTGCATAACTATGCCAGCAGAACAGAATGCTTCAAGTGCAAAACACCAAGAAATTTTGGTGACGCAGACTGA 531 0.4482 MTHHLVHNLFFNYFSKDIKTFACVILLSSFTLPQGNMSWSGGDWMCGACQHINFKKRDSCQSCGYPKFGGSDPTTYRYNWTEALAGDWYCTAMNCGAHNYASRSSCYRCGALKDGYSCGFGGNMDASGGYVSDCNYPPGWKTGDWICTRIGCGVHNYASRTECFKCKTPRNFGDAD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02522 176 ProSiteProfiles Zinc finger RanBP2 type profile. 141 172 IPR001876 -
Spst9g02522 176 SMART zf_4 143 169 IPR001876 -
Spst9g02522 176 SMART zf_4 42 66 IPR001876 -
Spst9g02522 176 SMART zf_4 86 112 IPR001876 -
Spst9g02522 176 Pfam Zn-finger in Ran binding protein and others 141 170 IPR001876 -
Spst9g02522 176 Pfam Zn-finger in Ran binding protein and others 85 113 IPR001876 -
Spst9g02522 176 ProSitePatterns Zinc finger RanBP2-type signature. 145 166 IPR001876 -
Spst9g02522 176 Gene3D - 81 115 - -
Spst9g02522 176 Gene3D - 32 69 - -
Spst9g02522 176 Gene3D - 134 172 - -
Spst9g02522 176 ProSiteProfiles Zinc finger RanBP2 type profile. 84 115 IPR001876 -
Spst9g02522 176 SUPERFAMILY Ran binding protein zinc finger-like 34 70 IPR036443 -
Spst9g02522 176 ProSiteProfiles Zinc finger RanBP2 type profile. 40 69 IPR001876 -
Spst9g02522 176 SUPERFAMILY Ran binding protein zinc finger-like 137 172 IPR036443 -
Spst9g02522 176 ProSitePatterns Zinc finger RanBP2-type signature. 88 109 IPR001876 -
Spst9g02522 176 SUPERFAMILY Ran binding protein zinc finger-like 85 115 IPR036443 -
Spst9g02522 176 PANTHER ZINC FINGER PROTEIN 85 173 - -
Spst9g02522 176 ProSitePatterns Zinc finger RanBP2-type signature. 44 63 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02522 Spst-Chr9 59056795 59058409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02522 - - gmx:100792208 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02522 9 59056795 59058409 Spst3g04892 3 100728633 100733150 PCT