Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02520 ATGGGGACGACGAAGAGCAATTCCACCTCAAAATCTGACATTGATGTCCACGACGAAAACGACAACGACGTCAACAACACCTCTCTGGTGTTGAATGTCTACGACCTCACCCCTCTCAACAATTATTTGTATTGGTTCGGGTTTGGAATCTTTCATTCTGGCATTGAAGTCATTTTAACGGAGGATGATTTACACGGTAAAGAATATGGATTTGGAGCTCATGACTTCCCAGCAAGTGGAGTATTTGAAGTGGAGCCAAAGAAGTGCCCTGGATTTATATACAGATGTTCTCTTACTTTAGGCCAAGTAAACATGCATCCTTCTGAGTTTCGAACTTTCATTGAGAATATTGCCAATGAGTATCATGGGGATACCTACCACCTCATATCCAAGAACTGCAATCATTTTACGGATGACATTTCAAATAGATTGAGTGGAAAACGAATCCCTGGTTGGGTGAATCGTCTTGCTAGACTAGGTTCACTCTGCAGTTGCCTACTTCCTGATTGTGTTGAAGTAACCACTGTTAAACAACTACCGGAATACCACGACTGTTCAGAAGATGAAATTACTGAGTCTCTGTCGTCTGCATCACCAAGTGCATCTCACTCAACGTCAGCACTCGAGGATGATCAAGAAAAGGTCCTTTTGTCACCTTTGGTTTGTATTTCTGGAGCGATGGTCTTAGCCAGGTAA 696 0.4267 MGTTKSNSTSKSDIDVHDENDNDVNNTSLVLNVYDLTPLNNYLYWFGFGIFHSGIEVILTEDDLHGKEYGFGAHDFPASGVFEVEPKKCPGFIYRCSLTLGQVNMHPSEFRTFIENIANEYHGDTYHLISKNCNHFTDDISNRLSGKRIPGWVNRLARLGSLCSCLLPDCVEVTTVKQLPEYHDCSEDEITESLSSASPSASHSTSALEDDQEKVLLSPLVCISGAMVLAR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02520 231 Pfam PPPDE putative peptidase domain 29 169 IPR008580 GO:0008233
Spst9g02520 231 Gene3D PPPDE domains 22 187 IPR042266 -
Spst9g02520 231 ProSiteProfiles PPPDE domain profile. 27 171 IPR008580 GO:0008233
Spst9g02520 231 PANTHER DESUMOYLATING ISOPEPTIDASE 26 207 IPR008580 GO:0008233
Spst9g02520 231 SMART DUF862_2a 27 176 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02520 Spst-Chr9 59025228 59032114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02520 K22763 - gmx:100810582 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02520 9 59025228 59032114 Spst9g02520 9 59025228 59032114 ECH
Spst3g04883 3 100625693 100629791 Spst9g02520 9 59025228 59032114 PCT