Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04883 ATGGGTGTGGACAAGGCGTCTAACTCCATTTCCACCTCACAATGCGACGACCAACATAGCAACAACAAAATCAACTCACTTGTGCGTTTGAATGTCTACGATCTCACCCCTGTCAATAACTACTTCTACTGGTTTGGATTTGGCATCTTTCATTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGATTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTCATATATAGATGTTCCATCACTTTGGGTCAAACCAATATGAATGCTTCTCAGTTCCGTACATTTATTGAAAGCATGGCTTCCGAGTATCATGGGGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGAGGATCTCTCCAATAGATTGACTGGGAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCTTTGTGCAGTTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCTGAATACCATGAATGTTCGGAAGATGAATTTGTTGAATCTATTTCACCTGCCACACCCCGCGAGTCAACAGAAATAGATGACGAGCAAGAAAAACCCCTTCTTTCATCATCAACTGCAACTGAGGATGTTACTTTCGTTAGAGAAAGCCAAGCAAAATAA 675 0.4222 MGVDKASNSISTSQCDDQHSNNKINSLVRLNVYDLTPVNNYFYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFIYRCSITLGQTNMNASQFRTFIESMASEYHGDTYHLITKNCNHFTEDLSNRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESISPATPRESTEIDDEQEKPLLSSSTATEDVTFVRESQAK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04883 224 MobiDBLite consensus disorder prediction 204 224 - -
Spst3g04883 224 MobiDBLite consensus disorder prediction 181 224 - -
Spst3g04883 224 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
Spst3g04883 224 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Spst3g04883 224 PANTHER DESUMOYLATING ISOPEPTIDASE 26 198 IPR008580 GO:0008233
Spst3g04883 224 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
Spst3g04883 224 Gene3D PPPDE domains 21 178 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04883 Spst-Chr3 100625693 100629791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04883 - K22763 gmx:100778961 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04883 3 100625693 100629791 Spst3g04883 3 100625693 100629791 ECH
Spst3g04883 3 100625693 100629791 Spst9g02520 9 59025228 59032114 PCT