Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02479 ATGCGGCGACGGGCCGCCGAGTTTCGGCGCCCGGTTCGGCGGCGGTTCGCTCATTGGATCTGGTTGCTTCTCGGCGCCTTCTCTTTTGCCGGTCTTGTTTTGTTCTTCGTGCAACATCATCACCGCGAATATCGCGACAATCGCCCCCTTCTGGAGAGAAATGCTAAAGTTGAAAACTCTGCCAAGAGATTGAATTTTACTGAAGAAATTTTAAGTGCAACATCCTTCTCACGGCAATTAGCAGAGCAAATGGTTCTGGCCAAAGCTTATGTGATTATTGCCAGAGAACACAATAATCTTCACCTTGCCTGGGAGCTTAGCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAACCTGTGACCATGGAGGAAGCTGAGCCAGTTATTAAAAGCCTGTCTTCTTTAATTTTCAAGGCACAAGATGTCCATTATGATATTGCAACCACTATAGTGACAATGAAATCATACATTCAAGCACTTGAAGAGCGTGCAAATACAGCAACTATTCAGAGCACCTTGTTTGCTCAAATATCAGCTGAAGCACTACCCAAGAGTCTTGTTTGCTTAAATGTGAAGCTTATGTCTGATTGGCTAAAGATGACATCCCGGCAAAAGTTTTTACACGAGAGTAGTATCTCCCCCGGGCTCACTGATAACAACCTTTATCATTTCTGCATTTTTTCAGATAATGTACTGGCAACATCTGTAGTTGTTAATTCAACAGTCATTAATGCTGATCATCCAAAACAGTTAGTCTTTCATATTGTTACTGATGGTATCATTTATGGAGCAATGCAAGCCTGGTTCCTCAGTAATGACTTAAAAGGGGCTACCGTAGAGGTGCAGAATATTGAGGAATTTCATTGGTTGAATGAATCTTATTCTCCAATTGTCAAACAGATACACAGTCCAGAATCACGAGCCTTTTATTTTGGACCTTATCAAGGTGTAAATGTCGAACCAAAATTGCAGAACCCCAAGTTTTTGTCTTTACTAAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACTACTTGAGAAGATTGTTTTCCTTGATGATGATGTTGTTGTTCAAAAGGACCTAACCCCACTTTTCTCACTGGATTTGCATGGAATGGTGAATGGTGCCGTTGAAACATGTCTAGAATCATTTCATAGGTACTATAAGTATCTCAACTTCTCAAATTCGATTATAAGCTCAAAGTTTGATCCACAGACATGTGGATGGGCATTTGGCATGAATATTTTTGACCTGGTTGCATGGAGGAAAGCAAATGTGACCGCAAGGTATCATTATTGGCAAGAGCAGAACGCTGATGGGACACTCTGGAAGCTTGGTGTACTTCCCCCTGCTCTTCTAAGCTTTTATGGTTTGACAGAACCACTAGACAGAAGATGGCATGTTTTAGGATTTGGTTATGACCTAAATATTGACAACCGCCTGATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCATTATGGAACAAGTACATAAATCAGAGTCACCCTCATCTACAAGATTGTGCCACAGGTTAA 1605 0.4156 MRRRAAEFRRPVRRRFAHWIWLLLGAFSFAGLVLFFVQHHHREYRDNRPLLERNAKVENSAKRLNFTEEILSATSFSRQLAEQMVLAKAYVIIAREHNNLHLAWELSSKIRSCQLLLSKAAMTGEPVTMEEAEPVIKSLSSLIFKAQDVHYDIATTIVTMKSYIQALEERANTATIQSTLFAQISAEALPKSLVCLNVKLMSDWLKMTSRQKFLHESSISPGLTDNNLYHFCIFSDNVLATSVVVNSTVINADHPKQLVFHIVTDGIIYGAMQAWFLSNDLKGATVEVQNIEEFHWLNESYSPIVKQIHSPESRAFYFGPYQGVNVEPKLQNPKFLSLLNHLRFYIPEIYPLLEKIVFLDDDVVVQKDLTPLFSLDLHGMVNGAVETCLESFHRYYKYLNFSNSIISSKFDPQTCGWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKLGVLPPALLSFYGLTEPLDRRWHVLGFGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWNKYINQSHPHLQDCATG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02479 534 FunFam Hexosyltransferase 231 527 - -
Spst9g02479 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Spst9g02479 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 531 IPR029044 -
Spst9g02479 534 CDD GT8_like_1 229 522 - -
Spst9g02479 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 56 532 IPR029993 GO:0047262
Spst9g02479 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02479 Spst-Chr9 58545003 58548175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02479 1 531 Glycosyltransferase AT2G20810 52.985 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02479 K13648 - gmx:100817381 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02479 9 58545003 58548175 Spst9g02479 9 58545003 58548175 ECH
Spst3g04786 3 99584826 99587756 Spst9g02479 9 58545003 58548175 PCT