Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04786 ATGCGACGACGGGCTGCCGATTTTCGGCGCCCGGTCCGACGGAGGTTTTCAAATTGGATCTGGCTTCTTCTCGCCTTCTCCTCTATCCTCGCTCTCCTTCTCTTCTTCCTTCAACACAACCACCACCAAGATCCGCATCATAATCCTTTGCCGGAGAGAAATGCAAGAGTTGAACATTTTGATAAGGAGAGTTTGAATTTTACTCAAGAGATTTTAAGTGTCACATCATTTTCGCGACAGTTAGCAGAACAAATGATTCTGGCCAAAGCTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAATTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCCATTACGTTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTCTTCTAATGTTTAAGGCACAAGACATCCATTATGACATTGCAACCACAATAGTAACCATGAAATCACATATTCAAGCTCTAGAAGAGCGAGCCAATGCAGCAATAGTTCAAAGCACCGTGTTTGGTCAAATGGCAGCTGAAGCAGTACCTAAGAGTCTTCATTGCCTAAATGTGAAACTCATGTCTGATTGGCTGAGGATGCCATCCCTGCAGGAACTCTCAGATGAGAGGAAAAACTCCCCAAGGCTTGTGGACAACAACCTATATCATTTCTGCATTTTTTCAGATAATGTTCTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAATTGGTCTTTCACATTGTCACTAATGGAGTCAATTATGGAGCAATGCTAGCATGGTTCCTGCTTAACGACTTTAAAGGAGCCACCATAGAGGTACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCATATTCTCCTCTTGTCAAGCAGCTCCACAGTCCTGATTCTCGAACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGGAACCCCAAGTATCTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAAAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAAGATCTGACCCCCCTTTTCTCTCTGGATTTGCATGGGAATGTGAATGGTGCTGTTGAAACTTGTCTGGAAGCATTTCATCGATACTACAAGTATCTCAACTTCTCAAATTCAATTATCAGCTCGAGGTTTGATCCGCAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCACAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTATGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAACCGTGGTTGAAGTTAGCTATAGGCAGGTACAAGCCACTATGGGACAAGTATATAAATCAAAGTCACCCTCATCTTCAAGATTGTGTCACAAGTTGA 1608 0.4272 MRRRAADFRRPVRRRFSNWIWLLLAFSSILALLLFFLQHNHHQDPHHNPLPERNARVEHFDKESLNFTQEILSVTSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRNCQLLLSKAAMTGEPITLEEAEPIIKSLSLLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQMAAEAVPKSLHCLNVKLMSDWLRMPSLQELSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMLAWFLLNDFKGATIEVQNIEEFHWLNASYSPLVKQLHSPDSRTFYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTTRYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCVTS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04786 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
Spst3g04786 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Spst3g04786 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
Spst3g04786 535 CDD GT8_like_1 230 523 - -
Spst3g04786 535 FunFam Hexosyltransferase 232 528 - -
Spst3g04786 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 62 533 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04786 Spst-Chr3 99584826 99587756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04786 1 532 Glycosyltransferase AT2G20810 56.238 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04786 K13648 - gmx:100805886 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04786 3 99584826 99587756 Spst3g04786 3 99584826 99587756 ECH
Spst3g04786 3 99584826 99587756 Spst9g02479 9 58545003 58548175 PCT