Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02471 ATGAGGTGGGAAAAGGTGAAGGGACTAGGAGGAGATGGACCAGGGAAGAGGTGGGGCCACACGTGTAACACCATTAGAGATGGCAGACTTCTTTATCTTTTCGGTGGTTACGGCAAAAATAACTGTCTGACCAACCAAGTTCACGTCTTCGACACTTTTAGGCAGAGTTGGAGTGAACCAGCAGTTAAAGGGTCCCCACCTATTCCTAGGGATAGTCATAGTTGCTCGGTTGTTGGTGATGGTCTTTTTGTGTTTGGGGGTACAGATGGGACCAGGCAACTGAATGATTTGCACATTCTAGACATTTCTTCACATACATGGATTGTTCCGACTGTGAGAGGGGAAGCACCACCGGCGCGAGAGGGCCATGGTGCTGCAGTTATTGGCAAAAGACTATTTGTGTTTGGCGGTTGTGGGACATCTGCAGATAATAATGACGTGTTCTACAATGACCTTTACATATTGAATACAGAAACGTATGTATGGATGTGTGCTACAACATCAGGCACTCCACCATCTCCTCGAGATAGCCACACTTGTTCATCTTGGAGAAACAAACTTATTGTGGTAGCTGGTGAAGATGAACATGACTATTATCTGTCTGATGTTCATGTCCTAGATACTGATACTCTAACCTGGAGCAAACTGCGTACGTTTGGCCAATTATTGCCACCTCGAGCTGGTCATTGTACAGTTTCTTTGGGCCAAACATTGTTTGTTTTTGGGGGCTTTTCGGAATCTCAAAGCCTATACAACGACCTTTATATGCTTGACATTGAGACTGGTGCGTGTTCGAAGGTGGTAACTACAACTAATGGTCCTTGTGCTAGATTTGCCGTAGCTGGTGACTGTTTAGACCCATATATGAATGGTGTTCTTGTGTTTTTGGGAGGTTGTAATAGAAATCTGGAGGCACTGGATGATATGTATTACCTATACACAGGGATTGCATGGGAAAGAGAAAATAGACCTGAGAAGTTATCCTTAAGGAAGCAATTAAAGCTGAAATGTCAAGGACAGAATCTCAGTCTTGTCCAAAACCCAGTTCTGTGTGGATATGAAGTGGGTGCTGACAGTAAACATCCCATGACAATCTTGAACTACAACCAACCAAGTAAAGTAGATATCCCAGGAAGGAAACCCGTGCCTCTTGGAAAGAGAACGTTTGTAGCCAAAGTTACTGAAAAAAGCTCTACAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCACGGAATTCTGTTTTCAAACAAGCCAAACATTCTTAGTCCAGTTTCTAATACTTCCAGTAGGAAAAGGACTGCTGGTGACGTTGGAACTCTTGCTTCAAATGGTATACATATACACTCAAGCAATGTAACAACTTCTACAGTTCTCGGGCAAGATAAAATGGAATATCAACAGGAATTATGGGGAGGGAGTTCAGAATTTGTTGGACGCCGTAAGGAAGCAGATAATACTAATGTTGTATCAAGTATCCCAACAACCGCTGCTGAGTCCTTTAAGGTTTCTGTCAACCCAGAACCAGAAGCTGTTTCTTTGAATCAAAATGCTGATGAGAAAAATGACACACCAAAATCCTTAATTGATAGCTTGAAACATGATGGATCCAATGATGTGACAAGTTCCAAAGGTGAAATTCAAATTGGTGATCAAATAAATGCGCCAGTTTCCAACTATGAAATTCCAAGACAAGCGAGTGATGCACCAAACTCTAATGCTACTTTCCTGAAACCTGCAGCAGCCGAGAGTTCTGTTTCTCTGCCAAATCAAGGTGAAACAGTGGATTGTACAACTCCAATGACAGAAGGACACAGTTAA 1827 0.4247 MRWEKVKGLGGDGPGKRWGHTCNTIRDGRLLYLFGGYGKNNCLTNQVHVFDTFRQSWSEPAVKGSPPIPRDSHSCSVVGDGLFVFGGTDGTRQLNDLHILDISSHTWIVPTVRGEAPPAREGHGAAVIGKRLFVFGGCGTSADNNDVFYNDLYILNTETYVWMCATTSGTPPSPRDSHTCSSWRNKLIVVAGEDEHDYYLSDVHVLDTDTLTWSKLRTFGQLLPPRAGHCTVSLGQTLFVFGGFSESQSLYNDLYMLDIETGACSKVVTTTNGPCARFAVAGDCLDPYMNGVLVFLGGCNRNLEALDDMYYLYTGIAWERENRPEKLSLRKQLKLKCQGQNLSLVQNPVLCGYEVGADSKHPMTILNYNQPSKVDIPGRKPVPLGKRTFVAKVTEKSSTGYTIETVIDGKPLHGILFSNKPNILSPVSNTSSRKRTAGDVGTLASNGIHIHSSNVTTSTVLGQDKMEYQQELWGGSSEFVGRRKEADNTNVVSSIPTTAAESFKVSVNPEPEAVSLNQNADEKNDTPKSLIDSLKHDGSNDVTSSKGEIQIGDQINAPVSNYEIPRQASDAPNSNATFLKPAAAESSVSLPNQGETVDCTTPMTEGHS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02471 608 MobiDBLite consensus disorder prediction 543 608 - -
Spst9g02471 608 Pfam Galactose oxidase, central domain 69 117 - -
Spst9g02471 608 Pfam Galactose oxidase, central domain 225 274 - -
Spst9g02471 608 Pfam Galactose oxidase, central domain 17 58 - -
Spst9g02471 608 MobiDBLite consensus disorder prediction 525 542 - -
Spst9g02471 608 Gene3D - 145 320 IPR015915 GO:0005515
Spst9g02471 608 MobiDBLite consensus disorder prediction 515 608 - -
Spst9g02471 608 Gene3D - 1 144 IPR015915 GO:0005515
Spst9g02471 608 SUPERFAMILY Galactose oxidase, central domain 3 217 IPR011043 -
Spst9g02471 608 Pfam Galactose oxidase, central domain 129 181 - -
Spst9g02471 608 PANTHER KELCH REPEAT DOMAIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02471 Spst-Chr9 58354120 58359617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02471 11 300 Acyl Lipid Metabolism Gene Families AT3G05420 29.739 4.20e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02471 - - gmx:100785267 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02471 9 58354120 58359617 Spst9g02471 9 58354120 58359617 ECH
Spst3g04772 3 99467830 99474800 Spst9g02471 9 58354120 58359617 PCT