Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02409 ATGGACCAAAAGAAAAGTGCTGACAAAGGGGAAAAGACTGATGTCATGCCTAAATTGTGGGATCAGTGTACCAAGGTTGCTTTGATTACTTTTGCCTACTCAGGAAGTAAATTTGAGCTAGTTGTGATAAATGATTTCGTTCTGCACCTCGGTGTCCAAAATTTTGGCCATAGGGTTATCGATGAACGAGGGAATAAAATACTCGAGGATGAGCTTTTAGTCGAGGCAAATGATGACAACTCGCGCGTCAGTGCAGCTGGTTTTTCAACTGTACATCTCCTGGAAGAGATCGACCAATGGTATTTGAGGATGGTTGTGTTGGACTTGGATGCCACTGCTCGTACAGTTGATCCACTAATGAGATTCCACCTTGCATTGTTTCTCGTGTTGGCTTCTCTTCAAGCCACTTTAAGTCAAGATATTGAACATGGTTCACTTCTAGTAGATGGAGCTCAAACAAAAGCTGAAACAGGTGATAATTTTATTTGTGCCACTATTGATTGGTGGCCTCATGACAAGTGTGACTACAACCATTGCCCTTGGGGATATTCATCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAGGCCATCCAAGCCCTCAAGCCACTGAGAATAAGACTTGGAGGTTCTTTGCAAGACCAGGTTCTATATGATGTAGGAAGTTTGAAGTCTCCTTGCCATCCCTTGCAAAAGGTTAAAGGTGGATTGTTTGGATTTTCAAAGGGATGCTTACACATGAAAAGGTGGGATGGGCTGAATCAGTTTTTCAATGAGACAGGGGCTATTGTGACATTTGGCTTGAATGCACTCCATGGGAAGCATCAGATTAGTCATAATGTTTGGGAAGGAGACTGGGACCCCACAAATGCTTATGATTTTATTAAGTACACTATTTCAAAGGGATACAAGATTGATTCATGGGAACTTGGGAATGAGTTGAGTGGTAAGGGAATTGGTGCAAGTGTTGATGTTGCACAGTATGGGAAAGATTTGATAAAGCTTAAGCAAATTCTAGGAACATTATACGAAAATTCCAAGTTCAAGCCTTCACTTGTGGCACCTGGAGGATTTTATGAAAGAGAGTGGTATGACAAGCTTCTTCAGGTTTCGGGTTCTGGCATAATCAATGTTCTGACTCATCATTTATACAATTTGGGCGCAGGTAGTGATGAGCATCTTGAAAGAAAGATTCTAGATCCTGAACGCTTAAGTAAGGTGGAATCAATTTTTGGCAACCTTTCTGAGACCATTCAAAAATATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAACAGCGGTGGCAATCATGTTTCTAATACTTTTCTTAACAGCTTTTGGTACCTAGATCAACTTGGAATAGCATCCAACTACAACACTAAAGTCTATTGCAGGCAAACTATAATTGGAGGGAACTATGGACTTCTCAATACTACCACCTTCACTCCCAATCCTGACTACTACAGTGCACTTCTGTGGCATCGATTAATGGGCAAAAAGGTTCTTGCAGTTTCAAGTGATGTTTCTCCCTTTTTACGCACTTATGCCCATTGTTCAAAAGACAGAGATGGTGTGACGTTACTTCTAATCAACTTAAGTAATGAGACCCGTTTTATTCTCACTGTTCGAAACCCTGTGAGCGCAAGTATTGAAAATGAAGTGGCCACAAACATCCAAAAGGAAAACACATTCTTTGATAAACTGAAGAAGGCATTTTCTTGGGTAGGAACAAAAGGGTCAGAGGTCACATTTAGGGAAGAGTACCACTTAACTCCAAAAGATGATTACCTCAAAAGCCAAACCATGGTGCTTAATGGTATTCCACTGGAGTTAACAGACCAGGGAGATCTTCCAAGGTTGGATCCAGTGAGTAGTAATGTGCGATCTCCAATATACATGACTCCTTTGTCCATTGCATTTGTTGTATACCCCAACTTTGATGCTCCAGCTTGTGCTACTCGGCGAAAATTTTAG 1995 0.415 MDQKKSADKGEKTDVMPKLWDQCTKVALITFAYSGSKFELVVINDFVLHLGVQNFGHRVIDERGNKILEDELLVEANDDNSRVSAAGFSTVHLLEEIDQWYLRMVVLDLDATARTVDPLMRFHLALFLVLASLQATLSQDIEHGSLLVDGAQTKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQALKPLRIRLGGSLQDQVLYDVGSLKSPCHPLQKVKGGLFGFSKGCLHMKRWDGLNQFFNETGAIVTFGLNALHGKHQISHNVWEGDWDPTNAYDFIKYTISKGYKIDSWELGNELSGKGIGASVDVAQYGKDLIKLKQILGTLYENSKFKPSLVAPGGFYEREWYDKLLQVSGSGIINVLTHHLYNLGAGSDEHLERKILDPERLSKVESIFGNLSETIQKYGPWTSAWVGEAGGAYNSGGNHVSNTFLNSFWYLDQLGIASNYNTKVYCRQTIIGGNYGLLNTTTFTPNPDYYSALLWHRLMGKKVLAVSSDVSPFLRTYAHCSKDRDGVTLLLINLSNETRFILTVRNPVSASIENEVATNIQKENTFFDKLKKAFSWVGTKGSEVTFREEYHLTPKDDYLKSQTMVLNGIPLELTDQGDLPRLDPVSSNVRSPIYMTPLSIAFVVYPNFDAPACATRRKF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02409 664 Pfam Glycosyl hydrolase family 79, N-terminal domain 145 460 IPR005199 GO:0016020|GO:0016798
Spst9g02409 664 SUPERFAMILY (Trans)glycosidases 159 504 IPR017853 -
Spst9g02409 664 PANTHER HEPARANASE-RELATED 134 659 - -
Spst9g02409 664 FunFam heparanase-like protein 3 181 502 - -
Spst9g02409 664 Gene3D Glycosidases 181 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02409 Spst-Chr9 57022236 57031886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02409 120 659 Glycoside Hydrolase AT5G07830 58.867 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02409 K07964 - gmx:100807012 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02409 9 57022236 57031886 Spst9g02409 9 57022236 57031886 ECH
Spst3g05014 3 101947666 101950624 Spst9g02409 9 57022236 57031886 PCT