Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05014 ATGGGCTGTCAAATAAGGTTTCTGGGTCTGTGTCTATGGATATACTTGGCAAGCCTAAGCTTCGTTGGGTGCTGTGTCTATGGGTCTGCAGTTGATAAAGGGAATGTTTTAGTTCATGGGAAAACTTTTATTGGAAGGATTGATGATGATTTTGTCTGTGCAACTCTGGATTGGTGGCCTCCTCAGAAATGTGACTACGGAAAATGTAGTTGGGGCCATGCTTCTCTGCTTAATCTGGACCTCAACAACAAAGTTCTGTTAAATGCAGTAAAAGCCTTTTCACCCTTGAAAATTAGATTAGGTGGCACTTTGCAAGACAAGGTCATATATGGAACTGAAGATAATCGAAAACCCTGTACTCCTTTTGTCTGGAATGCCAATGAAATGTTTGGTTTCACTCAAGGGTGCTTACCGATGTATAGGTGGGATGAGCTAAACAGCTTTTTCCAGAAAACAGGGGCTAAGGTTATCTTTGGATTAAATGCTCTTGCTGGAAAATCTATAAAGTCTGGTTTTGCTGTTGGACCTTGGGACTACACCAATGCTGAATCTTTGATACGATACACTGTCAGAAAGAAGTACACCATTCATGGTTGGGAACTTGGCAATGAATTGTGTGGAAATGGAATTGGAGCAAGTGTTTCAGCAGGTCAATATGCTTCTGATGTAGCTGCCTTAAGAAATATAGTTCAAAATGCATATAGTGGAATTGAACCAAAGCCACTAGTCATTGCACCTGGAGGCTTCTTTGACGCAGGTTGGTTCAAGGAGTTTATAAGCAAATCTGGTAAATCTGTAGATGTAGTCACCCACCACATTTATAACCTTGGGCCAGGAGTTGATGACCACCTAACTGACAAAATTCTTGACCCTTCGTATCTGAATGAAGTGTCTAACACATTCAGCAGCCTCAAACGTATACTTCAAAGTTCAGCAACCAATATTAAAGCATGGATTGGTGAGGCAGGAGGGGCTTATAATAGTGGCCATCATCTTGTGTCTAATGCATTTGTCTACAGCTTCTGGTATTTGGACCAGCTTGGCATGTCAGCAGTTTATGACACCAGAACATACTGCAGACAAAGTTTGATAGGAGGAAACTATGGTTTACTGAACACTAGTACTTTCATGCCAAATCCAGACTATTATAGCGCACTTCTATGGCACCGACTCATGGGAGGGCGTGTCCTCTCAACCACCTTCTTTGGGACGAAGAAGATAAGAACTTATGCCCACTGTGCAAAGGAATCCAAAGGGGTCACAATACTATTGCTCAACTTCGACAACAGCACCACTGTTGAAGCCAACGTGGTCTTAAAATTCAACAAGTTACCTCACCGTGGAGTGGATGAACCAGCCAGAAGAGAGTACCATTTAACAGCACCAGACAGGAATTTACATAGCCAAATCATGTTGCTAAATGGAAAAATTTTAAGTGTAAACTCAGCGGGTGAAATTCCTCCTTTGAATCCTATTTATGTAGACTCAACAAAGCCAATAATAGTTGGTCCTCTATCTATTGTATTTGCTCATATACCAAATGTTCTTCTTTCAGCATGCAGCTAG 1566 0.4151 MGCQIRFLGLCLWIYLASLSFVGCCVYGSAVDKGNVLVHGKTFIGRIDDDFVCATLDWWPPQKCDYGKCSWGHASLLNLDLNNKVLLNAVKAFSPLKIRLGGTLQDKVIYGTEDNRKPCTPFVWNANEMFGFTQGCLPMYRWDELNSFFQKTGAKVIFGLNALAGKSIKSGFAVGPWDYTNAESLIRYTVRKKYTIHGWELGNELCGNGIGASVSAGQYASDVAALRNIVQNAYSGIEPKPLVIAPGGFFDAGWFKEFISKSGKSVDVVTHHIYNLGPGVDDHLTDKILDPSYLNEVSNTFSSLKRILQSSATNIKAWIGEAGGAYNSGHHLVSNAFVYSFWYLDQLGMSAVYDTRTYCRQSLIGGNYGLLNTSTFMPNPDYYSALLWHRLMGGRVLSTTFFGTKKIRTYAHCAKESKGVTILLLNFDNSTTVEANVVLKFNKLPHRGVDEPARREYHLTAPDRNLHSQIMLLNGKILSVNSAGEIPPLNPIYVDSTKPIIVGPLSIVFAHIPNVLLSACS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05014 521 FunFam heparanase-like protein 3 71 390 - -
Spst3g05014 521 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Spst3g05014 521 Gene3D Glycosidases 69 390 - -
Spst3g05014 521 Pfam Glycosyl hydrolase family 79, N-terminal domain 34 348 IPR005199 GO:0016020|GO:0016798
Spst3g05014 521 PANTHER HEPARANASE-RELATED 22 520 - -
Spst3g05014 521 SUPERFAMILY (Trans)glycosidases 47 392 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05014 Spst-Chr3 101947666 101950624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05014 8 521 Glycoside Hydrolase AT5G61250 46.197 3.29e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05014 K07964 - gmx:100778008 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05014 3 101947666 101950624 Spst3g05014 3 101947666 101950624 ECH
Spst3g05014 3 101947666 101950624 Spst9g02409 9 57022236 57031886 PCT