Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02300 ATGTCCCAAGGATCTCCTCCACAAGACAGCAAAGAACCCTCGTCCGAACCCGATTCGCACAAGGAGGAAACAACCACCAACACCGCTGCTACTACCGCCACCGCCGCCCCCGATGCTGCTCCTCCCGCCCCCACCCGGAACCGACCCTCCCGTGCCTGCACCATTCGCACGGCTGCACGCCTCTACTCGGCGTCGCAGCCGGCGAGGCCGAAGGCCGCAAAGAGGGAGCCTCGCAGCGAGGAGTCGCCAGCGCCACCGTCATCGCCGCAGCCACAGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAACCGCCCCCGCCAGCGCAGTTGCCGCGCTACAACCTCCGCTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTTTTTAGGCATCTTTTGAATATTTCAGCAGAATTCTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACTCCCAACGACACATTGGGTGATATACACATGCCTTTGCTAAAGGAGTTTGTAGGATGTTGCTTTAGTGTGTCTTTGTTTAATTTGAGTGATATTGCAGTGGTTTTGGTTATGATTAGTGCACCTCTGGGTGCCAATGCTTTGGTCAGTGCAATTCCTCCCATAACACGAATGGCACTCACACATGACACTTGGATAACGGTGTTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCTGATGGGGATCTTCCTATTGTTGCTTCACATGGAGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAAGTTACATTGACAGCTCAATCAAACATGGCATTCCACTTTCGACATTTCGTAAGGAGCGTATTGGTGGTGATTCCCATGGAGTTTCTTATTGGTATGAAGATGACCAAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCACAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCTGGATGTTTCTGAGAAACTTTTCACAAGTAAAAACAGAACAGAGGTTTCTGTGGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAGGTTCACAAGAGAAAAGAGAGGTTGATGAAAAAACAACACAGACAAGCTCTTCTTCTGGATAATTTCTTGGGTGTTGATGGACTTGCTCTAGGTCGTTCACTTCGTGATAGGAAACCAGTTACATACACTTTCGATGATTATGATCGATCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACCTATACCCAGAAGAGAAGCAGGACCAAAACCTGAAGCTTTAACCAATGGTAAATGGAGTGGTCCTTCTCCTTCACGTGACCCTCAAGATCTAACTTTTGGCATGCCATCTCCAAAATCACCAGACCTCGAAGATATGGAGGAAGATAATCAAACTGACATACTGGACTTGGACCGAAGCAATAGGCGGAGGCAGAAGCCCAAGCGGTATTCAGAGAAAGAGTATGTTGAAGCATTGTCAGATAATGAGGCTGATTATGACAGTGATGATGATATTGTGGGAGAAGCCGTATATGATGAAGAGTATCTTCGGAAACGCAAGCAGAGAAGGAAGACTTCTAGTAGCTCTGGCTCTGAAGGAGATGAAGAATATAATTGGAATGAAGATAATGTTGAAGATGAAGAAGACGACGAAGAAGAAGATTCCTTGAGTGTCAGTGAGGATAGTGACAAGCCCCGCAAATTCAAGCGACTGGCAGGCCGTACTAGGAGGGAAACTAAACTCAGGTCTGTAGGTGAAATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACACAGAAACGGATAAATTACCGACAGTTAGAAATGTCTGATTCAGAAACAGAGTTTATCAAACCTGATAAGTCTAATGCATCAGATGATCAATCAGATCCTACTGAGAATGGGGAGTATATGATGGAAAGTGAAGATTCAGATGGCAACGATGATGAAGAACAAGAAACAAAGGATGTTGAGCCTGTTACCTACCCTGCAGAAGGGAACAACCCATATCCTGCTGTAGAGGAGAATGAACAAAGCCAAAACCAGCCTCCTGAAAAATCTAGTAGTCCAGGTCAGGAGGAAGTTGAGGGCACCGCAAAGCGACGCTTTCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACAGCAACGAAAGATGAAGGAAATGATGATTTTTGA 2322 0.4569 MSQGSPPQDSKEPSSEPDSHKEETTTNTAATTATAAPDAAPPAPTRNRPSRACTIRTAARLYSASQPARPKAAKREPRSEESPAPPSSPQPQQCSKIVTPLVEPPPPAQLPRYNLRSMWELASILNFLNLFRHLLNISAEFSAEEFETALLTPNDTLGDIHMPLLKEFVGCCFSVSLFNLSDIAVVLVMISAPLGANALVSAIPPITRMALTHDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDSSIKHGIPLSTFRKERIGGDSHGVSYWYEDDQIIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFLDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLALGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPEPIPRREAGPKPEALTNGKWSGPSPSRDPQDLTFGMPSPKSPDLEDMEEDNQTDILDLDRSNRRRQKPKRYSEKEYVEALSDNEADYDSDDDIVGEAVYDEEYLRKRKQRRKTSSSSGSEGDEEYNWNEDNVEDEEDDEEEDSLSVSEDSDKPRKFKRLAGRTRRETKLRSVGEIQSGLRRSKRATQKRINYRQLEMSDSETEFIKPDKSNASDDQSDPTENGEYMMESEDSDGNDDEEQETKDVEPVTYPAEGNNPYPAVEENEQSQNQPPEKSSSPGQEEVEGTAKRRFLDLNELAPSSGFDDGPNTATKDEGNDDF 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02300 773 MobiDBLite consensus disorder prediction 552 572 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 577 600 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 648 669 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 444 462 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 714 736 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 536 551 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 678 697 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 508 535 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 1 105 - -
Spst9g02300 773 MobiDBLite consensus disorder prediction 444 773 - -
Spst9g02300 773 PANTHER REMODELING AND SPACING FACTOR 1 45 766 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02300 Spst-Chr9 53837936 53845451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02300 - - gmx:100796430 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04643 3 98214938 98220356 Spst9g02300 9 53837936 53845451 PCT