Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04643 ATGGCACTCACGCGCGACACTTGGATAACCGTTGCAGATGGGGATCTTCCCATTGTTGCTTCCCATGGGGTGGAGATTGAAGTGTATAAATCACTTGATCCAGGGATTCGTGTTGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCATATATATGGGTATGAAGATGATCCTATTATGGGACATAGATTGTATCGAGAAATAAGGAAAACTGAAGTGATTCAACTGAAGAAAGGGAAATCAAGAGGTTCCCAGGTTCTTTCTAGCACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAAAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTCTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGAGGTTGAGAAAGTTCATAAGAAAAAGGAGAAATTGCTGAAAAAACAACACAGACAAACTCTTCTGCTTGATAATTACTTGGTTGTTGATGGGCTTGGTCCTGGGCGTTCTCTCCGCGACAGGAAGCCTGTTACCTACACTTTTGATGATTTTGATCGGTCAATCAACGAGGCCATTAAAGTAACCAAGCAGAAACAGCCATCTCCAGAACGTATGCCTAGAAGAGAATTGGTAGCAAAATCTGAAACTTTGACTAATGGTAAATATGGTCCTCAGTATGCCACACAAGATGTGAATTTTAGTATACCATCACCAGAATCAGCGGACTCTGACGATGACAAGGAAGACCATGAAAATGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAATCGTTATTCAGAAAGAGAGTTTGTTGAAGCAGTATCATATAATGAGGCAGACTTCGATAGTGATGATGATATTGTAGGTGAAGCTGTATATGATGAAGAATATCTCAAAAAACGTAAGCAGAAAAGGAAGTCTTCTAGTAGCTCTGAAGGAGAAGAAGAATATGAATGGGACGAATATAATATTGAAGATGACGAAGATGAAGATGAGGATGATGATGATTCCTTGAGCATCAGTGATGATAGTGACAAACCCCGCAAGGTCAACAAACAGTTGCCAGGACGTACCAGGAAAGAAACCAAACTCAGATCTGTGGGTGAGATTCAATCAAGTCTAAGACGCAGTAAGAGAGCAACTAGAAATTCTATAAATTACCGCCAATATGAGGCCTCAGAATCAGAAAGTGAGTTTATCAAATCTGAGAAATCTGATACATCAGCTGATCACTCAGAACCCAGTGAGAATGGTGAATACATGACGGAAAGTGAAGATTCAGACGGCAGTGATAATGAAGAACAAGAAATGAAAGTAGATGGGCCTGTTACTTATCCTGCAGTAGAAGAGAATGAACAAAACCAGGCTCCTGAAAAATTTAGTCCTGGTCAGGAGGAAGTTGAGACCACCGGAAAGAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCACTGGTTTTGACGATGGTCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 1518 0.4051 MALTRDTWITVADGDLPIVASHGVEIEVYKSLDPGIRVVILKALCDIRVEHIYGYEDDPIMGHRLYREIRKTEVIQLKKGKSRGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSLGKKLKIDMLPEVEKVHKKKEKLLKKQHRQTLLLDNYLVVDGLGPGRSLRDRKPVTYTFDDFDRSINEAIKVTKQKQPSPERMPRRELVAKSETLTNGKYGPQYATQDVNFSIPSPESADSDDDKEDHENDNLDRSNRQRRRPNRYSEREFVEAVSYNEADFDSDDDIVGEAVYDEEYLKKRKQKRKSSSSSEGEEEYEWDEYNIEDDEDEDEDDDDSLSISDDSDKPRKVNKQLPGRTRKETKLRSVGEIQSSLRRSKRATRNSINYRQYEASESESEFIKSEKSDTSADHSEPSENGEYMTESEDSDGSDNEEQEMKVDGPVTYPAVEENEQNQAPEKFSPGQEEVETTGKRRFLDLNELAPSTGFDDGPNTIMKDEDNDY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04643 505 MobiDBLite consensus disorder prediction 297 316 - -
Spst3g04643 505 PANTHER REMODELING AND SPACING FACTOR 1 11 477 IPR028938 GO:0006355|GO:0031213
Spst3g04643 505 MobiDBLite consensus disorder prediction 218 239 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 213 269 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 250 269 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 317 343 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 297 505 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 344 369 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 397 421 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 422 436 - -
Spst3g04643 505 MobiDBLite consensus disorder prediction 370 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04643 Spst-Chr3 98214938 98220356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04643 - - gmx:100795519 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04643 3 98214938 98220356 Spst3g04643 3 98214938 98220356 ECH
Spst3g04643 3 98214938 98220356 Spst9g02300 9 53837936 53845451 PCT