Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02285 ATGTCTCACGCCACAACGCAATCGCAGAACATAAAGCAGAGGGTCCTCGCGTGCCTGACGAAGCTCTCGGACCGCGATACACAATCCGCTGGAGCCACTGAACTCGAGTCCATCGCTCGAAGCCTGGACCCGCGCTCGGTTCCACTGTTCCTCTCCTGCATTCACTCCACTGACGCCTCCGACAAAACCCCCGTCCGCAAACAATGCGTGCACCTCGTGGCCACGCTCTCCCACGCGCACGGCGACACACTATCGCCGTTCCTCTCCAGAATTCTCGCCAACCTCGTGCGCCGCCTCCGCGACCCTGACTCTTCTGTACGGGCTGCCTGCGCCGAATCCGTCGGCGCGCTATCGGCGCGCGTCACCCGTCAGCCGTTCTCCTCTTTCCTGAAGCCGCTTGCGGAGGCGCTATTCACGGAGCAGGACCCAAACTCGCAGGCCGCCGCCGCTCTCTGTCTCGCCTCCGCCGTCGACGGGGCTTCGGATCCTGACCCAGCCAGGCTCGCCAGGCTGCTCCCGAGGTTCGAGAAGCTTCTCAAGAGCAAGGTGTTTAGGGCCAAGCCCGCGCTGCTGGTGCTCGTTGGAAGCGTCGTCGAGGCTCGCGGCGCGTCGAGTCGCGGCGCGTTGAGGAATTTGGTTCCCTGCCTTGTGGAGGCGCTCGGCAGCGTAGACTGGGCCACGAGGAAGGGCGCGGCGGAGGTGTTGAGGAAACTCGCGGTCGCGGAGAGGGACCTTCTATCGGAGTTCAAGGGTGGATCTTTCAAAGTGCTCGAGGATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAAGTTATGAATCAGATGTTGGATGCGTGGAAGCAGATTCCTGATGTTTCGGATGAATTCTCTCCACCTCCTCTCTCGCAGTCTTCTTCAAAGGAGAATGCAAGTGATGGGCGCTATCCTCCAGTATCTCAAAATTCATGTAGTCCGGGTTCCGTAATGAGTAAACTGAGGAAGAAATCGAGCCCGATCAGCAAATCAACTCCATCAGATAGATCTGTTGCTAGGAATGCTAATAAGTTGAGTGCCTTAAGTAGTGATCGGACGAGTTCGGGTGTTTTGCAGAAACTGAACCATAACCATTGGGATGTTCGAATTGCTGTGTCAAATGTTCCTGATCGAGGTGAATGTCAGCAGAGGGATGAAAATGTTTTAGAAAACAGCAAAAAGGATAAAAGCAGATTTTTCATGACAGAAACTAAACGGGCTCTATTCGATAAAAGTTCTGATGAGAAGATGCATAAATTTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCAGAAGAGAATCAAGACTCAGGTGCTGTCTGTAATGTAGCAAAGGATCTTCCCAGGAATGACAAAGAGAGTGAGGAATTATCTTTGATTCGTGCCCAGTTAGTTCAAATTGAGAAGCAGCAGTCAAGTCTGTTTGATCTTCTACAGAAATTCATTGGGAGCTCAGAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTCGAGTTGGCATTGGATGATATCTCGTATGATTTGGCTGTAACTAGTGGAAGGATGACTAAATCTGATGCTCCCAAAAATACATGTTGTCTGCTACCTGGTGCCGAATTTTTAAGCTCCAAATTCTGGAAAAAAACACAGAGCCGGTATCCATCCTACCGATTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAGTCATTACAGACCTAATAGGAACACCGAATCTATTGCAACAAACCACAGATTTGGGGTCCATGGTGATGGAAGCTTCATCACAAATCCTCTTGCAGAGATTAAAATTAATTCAAGGGAAATTTCAGGATCTGCAAGATCAGAGCTAGCTTGA 1863 0.5126 MSHATTQSQNIKQRVLACLTKLSDRDTQSAGATELESIARSLDPRSVPLFLSCIHSTDASDKTPVRKQCVHLVATLSHAHGDTLSPFLSRILANLVRRLRDPDSSVRAACAESVGALSARVTRQPFSSFLKPLAEALFTEQDPNSQAAAALCLASAVDGASDPDPARLARLLPRFEKLLKSKVFRAKPALLVLVGSVVEARGASSRGALRNLVPCLVEALGSVDWATRKGAAEVLRKLAVAERDLLSEFKGGSFKVLEDRRFDKVKLVREVMNQMLDAWKQIPDVSDEFSPPPLSQSSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPISKSTPSDRSVARNANKLSALSSDRTSSGVLQKLNHNHWDVRIAVSNVPDRGECQQRDENVLENSKKDKSRFFMTETKRALFDKSSDEKMHKFGGSKAGSRVVPCSEENQDSGAVCNVAKDLPRNDKESEELSLIRAQLVQIEKQQSSLFDLLQKFIGSSENGMRSLETRVHGLELALDDISYDLAVTSGRMTKSDAPKNTCCLLPGAEFLSSKFWKKTQSRYPSYRFSRTGSTPLLASSHYRPNRNTESIATNHRFGVHGDGSFITNPLAEIKINSREISGSARSELA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02285 620 SUPERFAMILY ARM repeat 8 376 IPR016024 -
Spst9g02285 620 Pfam HEAT repeat 92 118 IPR000357 GO:0005515
Spst9g02285 620 Coils Coil 456 476 - -
Spst9g02285 620 MobiDBLite consensus disorder prediction 287 345 - -
Spst9g02285 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 560 IPR033337 GO:0005874|GO:0008017
Spst9g02285 620 MobiDBLite consensus disorder prediction 290 345 - -
Spst9g02285 620 FunFam TORTIFOLIA1-like protein 3 isoform A 2 359 - -
Spst9g02285 620 Gene3D - 3 380 IPR011989 -
Spst9g02285 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02285 Spst-Chr9 53595735 53598362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02285 - - gmx:100778310 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02285 9 53595735 53598362 Spst9g02285 9 53595735 53598362 ECH
Spst3g04625 3 98009558 98012114 Spst9g02285 9 53595735 53598362 PCT