Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04625 ATGTCGTCGTCCCCGCAGAGCATAAAGCAGAGAGTCTTTGCATGCCTCACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCTGCGGTGGAACTCGAATCCATCGCTCGGTGCCTCGACGCAGCAACCTTGCCGGCGTTCCTCTCGTGTATGTACTCCACTGACGCCTCCGACAAGCCACCGGTCCGAAAGCAATGCGTGCAGCTCCTAGGGTTCCTTGCGGAGACTCACGGGAACATCCTTGCGCCATACTTGTCTAAAATTCTCGGCAGCGTCGTGCGGAGGCTCCGCGACGCGGACTCTTCGGTGCGATCTGCGTGCGTGACTTCGGTTGCGGCATTGTCGCATCACGTCAGCAGGCAGCCCTTGCATTCGTTCTTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGTTGGCGCGGCGCTGTGTCTCGCCGCCGCGATCAACGGAGCTCCGGATCCGGATCCTGCCCGGCTGGCGAAGCTCCTGCCGAGGTTCGAGAAGCTACTGAAGCGCGACGGGTTCAAGGCGAAACCTGCGCTGTTGACGCTCGTGGGAAGCGTCGTCGCGGTCCGCGGCGCTTCCGGTCACGCGCCAATGAAGAGTTTGGTTCCGTGCTTGGTGGAGGCGTTGAGCAACGATGATTGGGCCACGCGGAAGGCCGCAGCGGAGACTCTCGTGGTGGTCGCCAGAGTGGAGAGAGATCTCTTGTCGGAGTTCAAGGCTGAGTGTGTGAGAGTTTTCGAGAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCGGATGAAGTTTCGCCACCTCCTAAATCCCAATCTTCTTCTAAAGAGAATGCAAGTGATGGACGCCATCCTGCTGTCTCTCAAAATTCATGTAGTCCTGGTTCAGTGATGGCCAATCTGCGGAAGAAAACTACACCTTTTAGCAGATTCAGTCCAGCGGATAGTTCTTCTGCTAGCAATGCTAAGAATAGGACTGCTTCAAGTGGCAACAAGAGAATGAGTTCGATTGTTTCCCGAAAACTAAATCATAAGAATTGGGATACTCAAGTTGCCGTGGCTGATCAGGGAGATCTTCAGGAGGTGGATGGAATTTTGGAAAGAGGCAAAATGGATAAAAGCAAAATTTCAAAACCAGAAATGAAAAGGGCACTGCTAAATAGAAGTTCTGACGATAGAATACACAAATATGGTGGGTCCAAGGCTGGATCTCGTGTAGTTCCATATCATGAAGAAAGTCAAGACTCAGTTCCTGTCAGTGTTGTCCCTAAAGATCTCTATAGAAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGTTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTGCAGAAATTTATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGTCTTGAGTTAGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAGTCTGATGTTCATGGCAACACATGTTGCATGCTACCTGGAGCAGAATTTTTGAGCTCCAAATTCTGGAGGAAAACACATGGCCGGCATTCAATCCCGCGGTTCTCCAGATCAGGTGGCACCCCATCACTCGCTGCCATGAACTACCAAGCCGACAGGAATGCAGAGACCAAGTTGACAAGCCACAGATTTAGGCCTGATGGAGGTTTTATCACTAATCCACTCGCAGAGATTCATGCAGATTCAAGGAATTTTGCTACATCGGATATAGTTTAA 1830 0.5082 MSSSPQSIKQRVFACLTKLSDRDTQSLAAVELESIARCLDAATLPAFLSCMYSTDASDKPPVRKQCVQLLGFLAETHGNILAPYLSKILGSVVRRLRDADSSVRSACVTSVAALSHHVSRQPLHSFLKPLAEALFTEQDQNAQVGAALCLAAAINGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLTLVGSVVAVRGASGHAPMKSLVPCLVEALSNDDWATRKAAAETLVVVARVERDLLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVSPPPKSQSSSKENASDGRHPAVSQNSCSPGSVMANLRKKTTPFSRFSPADSSSASNAKNRTASSGNKRMSSIVSRKLNHKNWDTQVAVADQGDLQEVDGILERGKMDKSKISKPEMKRALLNRSSDDRIHKYGGSKAGSRVVPYHEESQDSVPVSVVPKDLYRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGAEFLSSKFWRKTHGRHSIPRFSRSGGTPSLAAMNYQADRNAETKLTSHRFRPDGGFITNPLAEIHADSRNFATSDIV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04625 609 MobiDBLite consensus disorder prediction 414 436 - -
Spst3g04625 609 Gene3D - 3 376 IPR011989 -
Spst3g04625 609 Coils Coil 450 470 - -
Spst3g04625 609 MobiDBLite consensus disorder prediction 287 356 - -
Spst3g04625 609 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Spst3g04625 609 MobiDBLite consensus disorder prediction 280 356 - -
Spst3g04625 609 FunFam TORTIFOLIA1-like protein 3 isoform A 1 357 - -
Spst3g04625 609 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 578 IPR033337 GO:0005874|GO:0008017
Spst3g04625 609 SUPERFAMILY ARM repeat 8 268 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04625 Spst-Chr3 98009558 98012114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04625 - - gmx:100789197 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04625 3 98009558 98012114 Spst9g02285 9 53595735 53598362 PCT