Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02221 ATGAACATTAACTTCTTCTGCTGCTTCTTCTTGTCGCTCTCATCTTTCCATGTTTCTCTAGCAAGTAAGGACACACCTCTGCCTCAAACACAGGAACACATAAACCCTTTCAGCCCCAAAGCCTCACTCATTCGCTATTGGAACACTCGAGTCACGAATGAGGTTCCAATCCCTCACTTTCTTCTAGCCAAAGCTTCACCTCTTACACCGCAACACTATGCTATTCTCAACAAACTTTTAAATGAAAAACCCAAACGCTACACTCCGAAGATTCACCACTCTCTCTGTTCCTCACCCAACTTGTACTGTTCCTTTGACGACACGCCAAACACGCATACAGTCCAACGCCAAAACGACGACGCCAACTTCGCCGTTTACAACAACAAACGCTTCGCCAACTACGGCTCCTCTCGAGTCGACGGAGTCGACTCGTTCAAGAACTACTCCAATGGCCTAAACGCCAACAACGACGCGTTTCGACGATACAGCGCCTCCTCGACGCGCCGCGGCGAACAGTTCAGGAACTACGCCGATAACGGCAATGTCGCGAACACGAACTTCACCAGCTACGGTTCCGCAGCAGCTCAATCCTCCACCGACTTCAACAACTACGACAAAACGGTGAACGTTCCAAACCTCGGTTTCACCACCTACGACTCCGGCGCCTCCAACCACAAACTGTCGTTCTCCAACTACGGCAACGAAACAAACTCCGGCGCGCAATCCTTCACGAGCTACGGAAAACGCGTTCGCGGTGGAACCAGCGAGTTCGCGAATTACGCCGGTGACGCGAACATTCTACAATCGGAGTTCAACAATTACGGCGACTTCAGCACCGGAGCAACCAACGACTCGTTCAAGTTCTACAGCGTCAACGGTAACAATCCTCGGAACGTTTTTAAAACATACGGCGCCGGATCCGGAGGATCCGCTGCCGATAATTTCATCAGTTACCGGAACCGCGCCAATGTCGGCGACGACTCATTCCAAAGCTACGCCGCGAGGTCAAAGTCCGGCACGGCAACGTTCGCGAACTACGGGATGTCGTTTAACGTCGGAAACGACAGTTTCGCTGAGTACGGAAAGGGCGCGTCGGGGAAGAGCTCGTTCGGGTTTAAATCTTACGGGTTGGGTCGCGCGTTTAAAGTGTATAACAAAGACGGCGCGTCGTTTTCGGAGTATCGCAATTTCAGCGCATATAGTGGTAGAGTTGTAAATAAGTTGGTAGAGCAGGGTAAGTTTTTCAGAGAATCGATGATGAAGGAAGGGGAAGTGATAGTGATGCCTGACATTAAGGATAAAATGCCTGCAAGGTCGTTTTTACCCCTGGCGATTGCTTCGAAATTACCGTTCTCGTCGTCGAGGATTGAGGAAATCAGGGAATTGTTCGACGCGCATAAGGGGTCTTCGACAGAGCGCGTGATGGTGAACGCGTTGGGGGAGTGCGAGAGGGCACCGAGCCGGGGCGAGACGAAACGGTGCGTTGCGTCTGCAGAAGAAATGATAGAGTTTGCTGCATCGGTGCTGGGCCCCAGTGTTGTGGTGAGGACCACGGAGAATGTGAACGGTTCAGGATCCAGTGTGATGATTGGTAAGGTCTACCCAGTGGACGGTGGAAAAGTAACCGAGTCAGTTTCGTGTCATCAGAGTTTGTACCCTTACTTACTGTATTATTGCCACAGTGTACCCCAAGTGAGAGTGTATGAAGCTGATATTCTTAACGTGGACACCAAGGAGAACATGAATCATGGTGTTGCCATCTGTCACCTTGACACGTCATCGTGGGGCCCAGAACATGGGGCATTCTTGGCATTGGGGTCTGGCCCTGGGAAAATTGAGGTGTGCCACTGGATATTCGAGAACGATATGACGTGGACCACTGCCAATTGA 1890 0.5111 MNINFFCCFFLSLSSFHVSLASKDTPLPQTQEHINPFSPKASLIRYWNTRVTNEVPIPHFLLAKASPLTPQHYAILNKLLNEKPKRYTPKIHHSLCSSPNLYCSFDDTPNTHTVQRQNDDANFAVYNNKRFANYGSSRVDGVDSFKNYSNGLNANNDAFRRYSASSTRRGEQFRNYADNGNVANTNFTSYGSAAAQSSTDFNNYDKTVNVPNLGFTTYDSGASNHKLSFSNYGNETNSGAQSFTSYGKRVRGGTSEFANYAGDANILQSEFNNYGDFSTGATNDSFKFYSVNGNNPRNVFKTYGAGSGGSAADNFISYRNRANVGDDSFQSYAARSKSGTATFANYGMSFNVGNDSFAEYGKGASGKSSFGFKSYGLGRAFKVYNKDGASFSEYRNFSAYSGRVVNKLVEQGKFFRESMMKEGEVIVMPDIKDKMPARSFLPLAIASKLPFSSSRIEEIRELFDAHKGSSTERVMVNALGECERAPSRGETKRCVASAEEMIEFAASVLGPSVVVRTTENVNGSGSSVMIGKVYPVDGGKVTESVSCHQSLYPYLLYYCHSVPQVRVYEADILNVDTKENMNHGVAICHLDTSSWGPEHGAFLALGSGPGKIEVCHWIFENDMTWTTAN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02221 629 SMART BURP_2 412 628 IPR004873 -
Spst9g02221 629 ProSiteProfiles BURP domain profile. 414 628 IPR004873 -
Spst9g02221 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 26 629 - -
Spst9g02221 629 Pfam BURP domain 414 626 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02221 Spst-Chr9 49893892 49895939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02221 - - gmx:100784264 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02548 3 73641986 73643824 Spst9g02221 9 49893892 49895939 ECH
Spst9g02221 9 49893892 49895939 Spst9g02221 9 49893892 49895939 ECH