Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02218 ATGAACAAATCGCTCTCCAAGGGCTCCGAGTCGTCCACTCAGTTCGACTCGCCGCTACGTTTCCACTCTCCGATGCGGTGGGACGGGACCGATCCGCCGGAGTCTCCGGAATACCGCTCGCCGGAAAACTCGCCAGAAAAGCACCCGGACCACTCCATGGCCATCGTCACCGTCGGCAAGCTCAAGCAGCTCGCTCCTGACAAGCGCGCAGAGCACCGGAAGCCGCCGGAAAACCCGCCGTCGGTGTTGGTGTTCAATGGTACGGTGACGGAGGAGACGCAGCGTCCGGCGGTGAATGCGGTTCCAGCGGTGGGCGGAGGCGAGCGGAGATCGAGGTCGTCAGGGTGGACGACGGAGGAAACGGTATGCAAGGCGGCGCTAGGGTTCCGGCTGAGCGAGATGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCGGCGGACAAGACGCAAGGTTGGAGTGGTGACTCCTTTGATCGCTATAGAGAATATAGGTATTGTTTATCTGTGAATGTTATTGGATTTGCATACTCGGCGTTGCAAGCATGTGATCTGGCATGTCAACTTGCCACTGGGAAACGCTTAATCAGTCATCACCTTCGCAACCATTTTGACTTCTTCTTGGATCAGGTTCTGGCTTATCTTCTGATATCAGCATCATCATGTGCAGCCACACGGGTTGACGATTGGATATCAAATTGGGGGAAAGATGAGTTCACAGAACTGGCCACTGCATCAATTGGAATGTCCTTCCTAGCTTTTGTTGCCTATGCTATGAGCTCACTCATCTCTGGTTACACCCTATGCAACCGCAGCTCCATGTGA 822 0.545 MNKSLSKGSESSTQFDSPLRFHSPMRWDGTDPPESPEYRSPENSPEKHPDHSMAIVTVGKLKQLAPDKRAEHRKPPENPPSVLVFNGTVTEETQRPAVNAVPAVGGGERRSRSSGWTTEETVCKAALGFRLSEMVVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIGFAYSALQACDLACQLATGKRLISHHLRNHFDFFLDQVLAYLLISASSCAATRVDDWISNWGKDEFTELATASIGMSFLAFVAYAMSSLISGYTLCNRSSM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02218 273 MobiDBLite consensus disorder prediction 1 55 - -
Spst9g02218 273 PANTHER CASP-LIKE PROTEIN 4A4 95 268 - -
Spst9g02218 273 MobiDBLite consensus disorder prediction 32 49 - -
Spst9g02218 273 MobiDBLite consensus disorder prediction 1 19 - -
Spst9g02218 273 Pfam Casparian strip membrane protein domain 122 255 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02218 Spst-Chr9 49784143 49785579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02218 - - gmx:100789870 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04578 3 97537098 97538200 Spst9g02218 9 49784143 49785579 ECH
Spst9g02218 9 49784143 49785579 Spst9g02218 9 49784143 49785579 ECH
Spst3g04578 3 97537098 97538200 Spst9g02218 9 49784143 49785579 PCT