Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04578 ATGAAGAACTCCGACGCCTCCACTCACTTCGAATCGCCTCACTCCCCTCTCCGCTTCCGATCCTCCCCGCTCTCCGACAACGGCGACCCCTTTCACTCGCCCGAAAACTCGCCGCTAAATGACCACCGAGACAACTCCAGGGCCATCGTCATCGTCGAGACTTCCACGCAGTTAGCCCAGGCCGCGCCCCCCGCCACCGATTCCGAGCACCGCAACCCGCCGCCCAATGAACCGCCGGAGGTAGTGGTCAGCCGCCCTGCGCGCCCGGAGTCTCGCTCTCCGGGAATTGGCGCCCGCGGGCGAACCAGGGCAGTGCCGCCTCCCATTCCTGCAGTGCCGAAAAGAGTGATGATACTGAAAAAGGTGGCATTAGGGTTCCGATTGAGCGAGGTGGTGCTGTGTCTGGTTTCGTTTTCGGTTATGGCCGCGGACAAGACTCGTGGTTGGAGCGGTGATTCTTTTGATCGCTACAAGGAGTACAGGTATTGTTTATCGGTGAATGTTATCGCATTTGTATACGCAGCGTTTCAAACGTGTGATCTGGCATATCAAGTGGTCACAGGGAGAAGCATGATCAATCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGTTCTGGCGTATCTTCTGATATCGTCTGCATCATCTGCAGCCACACGCGTCGATGACTGGCTATCGAACTGGGGAAAAGATGAGTTCACTGAGATGGCTAGTGCTTCTGTTGCGATGGCCTTTCTTGCTTTTATTGCCTTTGCTATTAGCTCCTTAATCTCTGGCTACAACCTCTGCACTCTCTTCTCCTAG 810 0.5506 MKNSDASTHFESPHSPLRFRSSPLSDNGDPFHSPENSPLNDHRDNSRAIVIVETSTQLAQAAPPATDSEHRNPPPNEPPEVVVSRPARPESRSPGIGARGRTRAVPPPIPAVPKRVMILKKVALGFRLSEVVLCLVSFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQTCDLAYQVVTGRSMINHHLRYHFDFFMDQVLAYLLISSASSAATRVDDWLSNWGKDEFTEMASASVAMAFLAFIAFAISSLISGYNLCTLFS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04578 269 Pfam Casparian strip membrane protein domain 119 252 IPR006702 -
Spst3g04578 269 MobiDBLite consensus disorder prediction 1 106 - -
Spst3g04578 269 MobiDBLite consensus disorder prediction 1 34 - -
Spst3g04578 269 PANTHER CASP-LIKE PROTEIN 4A4 90 265 - -
Spst3g04578 269 MobiDBLite consensus disorder prediction 49 63 - -
Spst3g04578 269 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04578 Spst-Chr3 97537098 97538200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04578 - - gmx:100812568 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04578 3 97537098 97538200 Spst9g02218 9 49784143 49785579 ECH
Spst3g04578 3 97537098 97538200 Spst3g04578 3 97537098 97538200 ECH
Spst3g04578 3 97537098 97538200 Spst9g02218 9 49784143 49785579 PCT