Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g02214 | ATGGAAGAGTTGAAGATGCCGGGAATTGTTATAAACGGGGTTTATGATGAAGGGGAAGGTAATGAGATGAATGCGAACCGTGATTCCCCTTCTAAGGAAACGTTGAATCTGGTTAAGTCCCCCAGGGGTTCCTCGAGTCCGCGAAGAGGTGAAGGGGATGCTACCAATTTTGGGGGTGATAAGGTGATTGAGCCTTCCATTGAACAGCTTTATGAGAATGTGTGTGACATGCAGAGTTCGGATCAGTCGCCTTCAAGGCAAAGTTTTGGATCTGATGGGGATGAGTCTAGAATTGATTCGGAGTTGCGCCACCTAGTTGGGGGACGGATGAGGGAGGTAGAGATAATGGAAGAGGAAGTTGGGGAGGGGAAAGGGCGAGAAGGGAGTTCAAGTAGTGAAATATCTTCTGGATTGGGTGGCTTGTCCAATGATAAAATGTTGGATCATGTGACTGAGATTCAGGAGGTTCAGCCTGCAGCTACTAGTTCTGGTTCCACAGAAAAATCTGTTAAAGCATCTAGTTCAGGGGTGGGACTTGATGCTTCCCCCAAATCAACGGCCAAGGGAAAAAGTCCTCTCCCAAAACCTCCTGTGGAAAGAAAGAATGGTAGGCCTTTGAGAAAACATAGTGGTGTTGCTGGCGTGAAGAATTTGAAGAATTCTCCCTTGGGAAATAAGTCAGTGTCACGAAACCGTGTTGAGAAAACGGCTGATTCAGCATTAGAGAGTCGTGAGAGGGCACCACTATTACTAAAACAAGCGAGAGATATGATTTCATCAGGGGATAATCCGCATAAGGCTCTTGACTTAGCTCTTCAAGCAATAGAACTGTTTGAGAAGTTAGATGATGGGAGTTTGGAGCTGGTTATGTGTTTACATGTTACAGCAGCAATATATTGCAGCTTGGGTCAATATGGTGAGGCAATTCCAATTCTGGAGCGCTCAATTGAGATTCCTGTTGTTGGGGAAAGTCAACAACATGCCCTCGCTCAATTTGCTGGTCACATGCAACTGGGAGACACCTATGCTATGCTGGGCCAGCTTGAGAACTCAATTACGTGCTACACCACTGGGTTAGAAGTCCAGAAGCTGGTTTTGGGAGAGACAGATCCTAGGGTTGGTGAAACTTGTCGATATGTGGCTGAAGCCAATGTTCAAGCATTGCAATTTGATGAAGCAGAGAGGCTTTGTCAAATGGCTCTTGATATTCATAAAGCAAATAATTCAGCTCCATCTCTTGAAGAGGCAGCAGATAGGAGGCTCATGGGCCTTGTATGTGAGACAAAAGGAAATCACGAAGCTGCTCTTGAGCATCTTGTTCTAGCCAGCATGGCAATGGTAGCTAACGGCCAGGAAGGGGATGTGGCTTCTGTTGACTGCAGCATTGGAGACACATACTTATCATTGTCTCGATATGATGAAGCTATCTTTGCATATCAGAAAGCGTTAACAGCTTTCAAGACCAACAAAGGAGAGAATCATCCAGCAGTGGGATTAGTTTTTGTACGTTTGGCTGACTTGTATAACAGGATAGGGAAAATAAGGGAATCAAAATCATATTGTGAGAGTGCACTTAAAATATACGAGAATCCAATTCCTGGAGTTCCTCCAGAGGAGATTGCTAGTGGATTTACAAATATTTCAACTATCTATGAGTCTATGAATGAGCTTGAACCGGCGCTCAAATTACTGCAGAAAGCATTGGAGTTATACAATGATGTCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGAGTCATGTACTACATGTTGGGGAACTATTCTGAATCTTACGAGACTTTGAAGAATGCTATTTCAAAGCTTCGTGCTGTTGGAGAAAAGAAATCATCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCTTGTGTGCAGCGGTATTCCTTAAGTGAGGCTACAGAATTATTTGAAGAAGCGAAGTGTATTTTGGAACAAGAGTATGGTCCGTATCACCCCGAAACACTTGGGGTATGCAGTAATCTTGCTGGCACATACGACGCAATTGGCAGGCTGGATGATGCAATTCAAATTCTGGAGTATGTTGTTAGCACGAGGGAGGAAAAGCTTGGGACGGCAAATCCTGACGTGGATGAGGAGAAGAGAAGGTTGGGTGAGTTGTTGAAAGAAGCAGGTAGAGTTCGGAGCAGAAAAACCAGGTCACTTGAGAACCTTCTTGATGGCAATGCTCACACTGTAAACAACGTTGTCATCAGGGCCTGA | 2253 | 0.4461 | MEELKMPGIVINGVYDEGEGNEMNANRDSPSKETLNLVKSPRGSSSPRRGEGDATNFGGDKVIEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKGREGSSSSEISSGLGGLSNDKMLDHVTEIQEVQPAATSSGSTEKSVKASSSGVGLDASPKSTAKGKSPLPKPPVERKNGRPLRKHSGVAGVKNLKNSPLGNKSVSRNRVEKTADSALESRERAPLLLKQARDMISSGDNPHKALDLALQAIELFEKLDDGSLELVMCLHVTAAIYCSLGQYGEAIPILERSIEIPVVGESQQHALAQFAGHMQLGDTYAMLGQLENSITCYTTGLEVQKLVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANNSAPSLEEAADRRLMGLVCETKGNHEAALEHLVLASMAMVANGQEGDVASVDCSIGDTYLSLSRYDEAIFAYQKALTAFKTNKGENHPAVGLVFVRLADLYNRIGKIRESKSYCESALKIYENPIPGVPPEEIASGFTNISTIYESMNELEPALKLLQKALELYNDVPGQQSTIAGIEAQMGVMYYMLGNYSESYETLKNAISKLRAVGEKKSSFFGIALNQMGLACVQRYSLSEATELFEEAKCILEQEYGPYHPETLGVCSNLAGTYDAIGRLDDAIQILEYVVSTREEKLGTANPDVDEEKRRLGELLKEAGRVRSRKTRSLENLLDGNAHTVNNVVIRA | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g02214 | 750 | ProSiteProfiles | TPR repeat profile. | 456 | 489 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | PANTHER | PROTEIN KINESIN LIGHT CHAIN-RELATED 3 | 58 | 740 | - | - | |
| Spst9g02214 | 750 | Gene3D | Tetratricopeptide repeat domain | 333 | 442 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | Gene3D | Tetratricopeptide repeat domain | 240 | 332 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | MobiDBLite | consensus disorder prediction | 1 | 241 | - | - | |
| Spst9g02214 | 750 | ProSiteProfiles | TPR repeat profile. | 541 | 574 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SUPERFAMILY | TPR-like | 295 | 609 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | Pfam | Tetratricopeptide repeat | 665 | 706 | - | - | |
| Spst9g02214 | 750 | Gene3D | Tetratricopeptide repeat domain | 443 | 616 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | MobiDBLite | consensus disorder prediction | 92 | 126 | - | - | |
| Spst9g02214 | 750 | Pfam | Tetratricopeptide repeat | 454 | 530 | - | - | |
| Spst9g02214 | 750 | SMART | tpr_5 | 374 | 407 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 666 | 699 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 332 | 365 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 456 | 489 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 289 | 322 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 541 | 574 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 498 | 531 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | SMART | tpr_5 | 582 | 615 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | Gene3D | Tetratricopeptide repeat domain | 617 | 723 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | SUPERFAMILY | TPR-like | 462 | 570 | IPR011990 | GO:0005515 | |
| Spst9g02214 | 750 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - | |
| Spst9g02214 | 750 | MobiDBLite | consensus disorder prediction | 24 | 43 | - | - | |
| Spst9g02214 | 750 | Pfam | Tetratricopeptide repeat | 544 | 572 | IPR019734 | GO:0005515 | |
| Spst9g02214 | 750 | MobiDBLite | consensus disorder prediction | 72 | 91 | - | - | |
| Spst9g02214 | 750 | SUPERFAMILY | TPR-like | 582 | 724 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst9g02214 | Spst-Chr9 | 49567025 | 49570002 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g02214 | - | - | gmx:100783201 | 1178.31 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst3g04576 | 3 | 97520181 | 97523030 | Spst9g02214 | 9 | 49567025 | 49570002 | ECH | |
| Spst9g02214 | 9 | 49567025 | 49570002 | Spst9g02214 | 9 | 49567025 | 49570002 | ECH | |
| Spst3g04576 | 3 | 97520181 | 97523030 | Spst9g02214 | 9 | 49567025 | 49570002 | PCT |