Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02211 ATGGCTTCTCAATCCCATTCTCTTCCCATTTCCACACTTCAAAACACAGGTGGTGAAATTGCACACACAGAAAATGTTGATCAGCATAATAGTGAAGAGGAGCTTGGTAAAAGGAGTTCAGATGCATCTGTGTTTGTGAACTCAGAACCAATGCGCGAGGATCAAATTCAGAATGCTGTGAAATTTCTGTCGCACCCGAAAGTTAGAGGTTCTCCTGTCATCCATAGGCGGTCGTTTCTGGAGAAGAAGGGCCTTACCAAGGAGGAGATAGATGAAGCCTTTCGGCGCGTTCCTGATTCAACTTCCAGTGTGCAGACAGCTGGTGTAAATCAAGATGGACAATTGAAGCCATCTTCAAACATTCAGCAGCAAGGCCAACCACAGGCTTTGCAGCCGATTGTACCAGCTTCTGCTGGTGTTATTACTTCGCTAGGTACCTTGTCACGTCGCCATTTTCACTGGTCTCATGCCCTTATTGCAGTTGGATTACTAGCTACTTCCGGTGTTGGTACAGTTATACTAATAAAGAATTCTGTTCTCCCTTGGTTAAAATCCTGGTTGCGCAATGTTGTCCTAGAAGAGGGGAATAACCAATTCAAGAGAACAGACTCAAAACCAACATTGGCAGAAGAAGCTGCGCAGGCTGCAAAAGCAGCTGCAGTTGCAGCTGCTGATATGGCTAAAGCTAGCCAAGAATTACTGAGTTCTAAAATTGAAGCCAAGAGATATTTTGTAGAAGTTGTGAGCCTTTTGGATAAACAAGTGAAAGAAATGAAGTTGATGACTGACGCAATAAGAAGATTAGAAGCTTCCGGTGAACTCTATGTCTCCAAGCAAGAAAATCGCCAAGTCACTCAAACAAGTTCAAAGATACAACAACTGATTGTTAATGGGAAGTCAGGCTATGAATCTCAATCAGTGAGATCTTCTTCCCCTCCTGTATCTGTTCAAGCATCTAGTGCTCCTCATCCAAAATCATATATGGAGATAATGGCCATGATTCAAAGAGGAGAGAAGCCTTCTAACATTAGAGAAATTGATGATTCTCCCCCCAACCCTTATCAGCAACCATCAAACCCTCGTCTACCACCTAGGCCCAAGCCTTGGGAGGTTAGTCAGTTGCAAAACACTTCAACCCAAGTCCTCCAGTATCAAGCAAATGGCAAGCTCCAAGATAGTGGTGAGAACTCAGTACCCTGGTGGCAAACGAAGAACATCAGAATCAAAGAGATTGATAACGAAATCGAGTATAACGTAGCATCTGCTGCATCCAATCAGCAGGCAGTCCAACGATTGTGGGTTCCTCCTCAACCTCCTCCCATAGCAATGCCGGAGGCTGCGGAAGCAATCAGACGCCCAAGGTCATTAGTGCAAAAGGAAGTGGTTCAGGATGATCAGTCAGCACCTCATTTGTCAGAGTTCTCTAACGGATCCAATTCGGAAGATGCAATAGAAGGCAACATCATCAACTCACTTGTCAGTTCTGGAAAGATCCAAAATCATGAAGAAAGTTACGAAGAAAAATGA 1527 0.4414 MASQSHSLPISTLQNTGGEIAHTENVDQHNSEEELGKRSSDASVFVNSEPMREDQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPDSTSSVQTAGVNQDGQLKPSSNIQQQGQPQALQPIVPASAGVITSLGTLSRRHFHWSHALIAVGLLATSGVGTVILIKNSVLPWLKSWLRNVVLEEGNNQFKRTDSKPTLAEEAAQAAKAAAVAAADMAKASQELLSSKIEAKRYFVEVVSLLDKQVKEMKLMTDAIRRLEASGELYVSKQENRQVTQTSSKIQQLIVNGKSGYESQSVRSSSPPVSVQASSAPHPKSYMEIMAMIQRGEKPSNIREIDDSPPNPYQQPSNPRLPPRPKPWEVSQLQNTSTQVLQYQANGKLQDSGENSVPWWQTKNIRIKEIDNEIEYNVASAASNQQAVQRLWVPPQPPPIAMPEAAEAIRRPRSLVQKEVVQDDQSAPHLSEFSNGSNSEDAIEGNIINSLVSSGKIQNHEESYEEK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02211 508 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 483 IPR025655 GO:0005515|GO:0005778|GO:0016560
Spst9g02211 508 MobiDBLite consensus disorder prediction 342 370 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 25 39 - -
Spst9g02211 508 Coils Coil 251 271 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 460 508 - -
Spst9g02211 508 Gene3D - 44 107 IPR036388 -
Spst9g02211 508 MobiDBLite consensus disorder prediction 468 499 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 302 322 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 1 24 - -
Spst9g02211 508 Pfam Family of unknown function (DUF5572) 322 371 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 353 367 - -
Spst9g02211 508 Pfam Pex14 N-terminal domain 52 96 IPR006785 -
Spst9g02211 508 MobiDBLite consensus disorder prediction 98 126 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 1 43 - -
Spst9g02211 508 MobiDBLite consensus disorder prediction 97 126 - -
Spst9g02211 508 FunFam Peroxisomal membrane protein PEX14 44 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02211 Spst-Chr9 49517466 49527619 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02211 K13343 - gmx:100807229 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04573 3 97469907 97477614 Spst9g02211 9 49517466 49527619 PCT