Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02208 ATGGAACCTATTACATTCTCTCAACATGAAGAAGATTCTGGTCTTTCAGATTGCGAGAGCGCTGTTTCAGCCACTGGAATAGTGCCACAACAAGAAGGTTTCTTCGTTAGACTTGGAGAAGGTGATGCACTTCACGATCTTATCAAGAGACGCTTTATTTGTGGGCTGGGCCTGCTTGGGCACAAAACGGAAGTTGTTTCCGTTCACCGAAACACGTGTTCTGGTGTCGTTTCCCAGGCACGGCTTCAGTCGTTTCAGGTTCATGCTAGGGCGGTGGCAAAACTGCGTGAAGGAAATGCCAACGTGAAGTATGCTTGGTATGGAACTCGCGGCGAGGAGGATGTAAACGACATCGTTTCGCACGGGTTTGCTTATACACACGGTCCTAAGCTTGTTCTTTCTCCCGATGACGCTCCTCTCCAAAGTGTTAGAGAGTGTGTGGCTGGGAAAGACGGTGTGAGGCATATGCTACTGTGCCGCGTTATTCTAGGGAGACCGGAGCTTGTTGACGGTGGCACAGAACAATGGTACCCCAGTTCAGTTAAGTATGACTCTGGTGTGGATAGTTTTTCGGCTCCTACCAAGTACATAATTTGGAGTAACCGCATGAACACTCATGTCTTGCCTGCATACGTTATTAGCTTCAGGGTTCCTTCTTGCAAAGGGTGTGAGAAGAGTGAAGAAGAACCTTTGAGACCTACTTCCCCTTGGATGCCATTCCCAACTCTGATTTCTGTGCTTTCAAAGGTTTTGGCTCCTCATGATATTGTTCTCATCTCCAAGTTGTACAAAGAAAAAAAAGAGAAGAAGATCTCACGACGTGAACTTATAGGAAGAGTGAGACAAATAGCAGGGGATAAGTTGCTATTTGCAGTCATCAAATCTTACAGAGAAAAGGATGGATGTGTAATAGTGTACAGCTAG 924 0.4621 MEPITFSQHEEDSGLSDCESAVSATGIVPQQEGFFVRLGEGDALHDLIKRRFICGLGLLGHKTEVVSVHRNTCSGVVSQARLQSFQVHARAVAKLREGNANVKYAWYGTRGEEDVNDIVSHGFAYTHGPKLVLSPDDAPLQSVRECVAGKDGVRHMLLCRVILGRPELVDGGTEQWYPSSVKYDSGVDSFSAPTKYIIWSNRMNTHVLPAYVISFRVPSCKGCEKSEEEPLRPTSPWMPFPTLISVLSKVLAPHDIVLISKLYKEKKEKKISRRELIGRVRQIAGDKLLFAVIKSYREKDGCVIVYS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02208 307 ProSiteProfiles PARP catalytic domain profile. 19 235 IPR012317 GO:0003950
Spst9g02208 307 Gene3D - 35 217 - -
Spst9g02208 307 ProSiteProfiles RST domain profile. 231 302 IPR022003 -
Spst9g02208 307 Pfam RCD1-SRO-TAF4 (RST) plant domain 232 297 IPR022003 -
Spst9g02208 307 SUPERFAMILY ADP-ribosylation 62 217 - -
Spst9g02208 307 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 24 299 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02208 Spst-Chr9 49377202 49378915 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02208 - - vra:106760244 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02208 9 49377202 49378915 Spst9g02208 9 49377202 49378915 ECH
Spst3g04569 3 97379396 97382349 Spst9g02208 9 49377202 49378915 PCT