Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04569 ATGGACCGACCAATTCGCGATTCGTCAGACACCTATACTTATGTTTCCGATGAGGAATCCGTTGTTTCTGATTGTGAGAGCGGGGTTTCCGGCGGCGAGGGGCCGTTCAGCGGAGGCTTTGTGCCGGCAGGGGATGATGGACATCATGTCCAGGCTAGATTCGTCCGGACCTTGGCCTCTAACGGGTTGAGACCCGAGGTTGTTGCGATTGGCAAGAACGCGCATTCCTCCGTGATGGCGCGAGCGCGTGCTCAGTCCTTTCAAGTTTTCGCGCGTGCGGTGACGGAATTGCGCGATGGTCATGCCAACGTTAGGTTCGCTTGGTACGGTGCGTCCGGTAAGGATGAGATAGCTGATATCGCCCAACATGGTTTCGGCCACGCGCACTGTAACGGCTTGCGTCTCTCTCCACTTGATTGCCCACTTGAAAGGCACGCTGTTAAGAGCTCCGGTGTCGACGGTGACGGTGTGAGGTACTTGTTGCTGTGTAGCGTTATCTTGGGGAAGACGGAGGTGGTGCCACGTGGCTCCAACCAATGCCGTTCGAGTTCTGAAGAGTATGATTCTGGGGTGGACGATCTTTTGGCTCCCAAGGAGTATGTTATTTGGTGTAACCGGATCAACACTCATGTATTGCCCGAATACGTATTGAGTTTCACGCTTCCTTCCTTGAAAGGGAATGTGAATATTGGGAAACCTTTGAGGCCTTCTTCGCCATGGATGCCATTCCCAGCTTTGGTTTCGGTGCTCTCGAAGATTTTGCCTCCGGCTCAAGTTGCCATCATTGTCAAGATACGCAAAGATTATACGGAATTGAGGATTTCTCGATATGAGATGATACAGAGAGTAAGAAATATAGCAGGCGACAAATTGTTAATTTCCATCATCAAATCTTTCAGAGCCAAGAAAACACCTGCAAGCTTTAAAGCAAACAAGGGGAAAGAAGGGCAAGGGGACAGCCAGTAG 966 0.5104 MDRPIRDSSDTYTYVSDEESVVSDCESGVSGGEGPFSGGFVPAGDDGHHVQARFVRTLASNGLRPEVVAIGKNAHSSVMARARAQSFQVFARAVTELRDGHANVRFAWYGASGKDEIADIAQHGFGHAHCNGLRLSPLDCPLERHAVKSSGVDGDGVRYLLLCSVILGKTEVVPRGSNQCRSSSEEYDSGVDDLLAPKEYVIWCNRINTHVLPEYVLSFTLPSLKGNVNIGKPLRPSSPWMPFPALVSVLSKILPPAQVAIIVKIRKDYTELRISRYEMIQRVRNIAGDKLLISIIKSFRAKKTPASFKANKGKEGQGDSQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04569 321 SUPERFAMILY ADP-ribosylation 88 220 - -
Spst3g04569 321 Pfam RCD1-SRO-TAF4 (RST) plant domain 235 300 IPR022003 -
Spst3g04569 321 ProSiteProfiles PARP catalytic domain profile. 24 240 IPR012317 GO:0003950
Spst3g04569 321 ProSiteProfiles RST domain profile. 234 305 IPR022003 -
Spst3g04569 321 Gene3D - 42 220 - -
Spst3g04569 321 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 48 301 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04569 Spst-Chr3 97379396 97382349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04569 - - gmx:100784311 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04569 3 97379396 97382349 Spst9g02208 9 49377202 49378915 PCT