Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02198 ATGCTGAGAATCGCTGCAAGCGCAAAGAGACTTCTTCATACGCCGTCGTTGGAGGCGCAACCGTTGGGGTTTAGGGTTCTGCCGCGGCTCTACCACGAGAGGGTGGTGGACCACTACGACAACCCCCGCAATGTCGGATCCTTCGACAAGAACGACCCCACCGTGGGAACGGGTCTTGTTGGAGCACCCGCGTGTGGCGACGTAATGAAACTCCAAATTAAGGTTGACGAGAAAACTGGAAAGATCGTCGATGCTCGCTTCAAAACCTTCGGTTGTGGATCCGCCATCGCTTCTTCCTCCGTCGCTACTGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTGTCGATTAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCCGTCAAGCTTCATTGCAGCATGCTTGCAGAGGATGCTATAAAAGCAGCTGTAAAAGATTATGAAGCAAAACGCGCCTCAGCAACTGCTGATGGACATGGAACAACCGGAGAGAAAGCTGCCACTGCTTGA 519 0.5125 MLRIAASAKRLLHTPSLEAQPLGFRVLPRLYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASATADGHGTTGEKAATA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02198 172 SUPERFAMILY SufE/NifU 30 154 - -
Spst9g02198 172 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Spst9g02198 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 9 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
Spst9g02198 172 FunFam Iron-sulfur cluster assembly protein 31 170 - -
Spst9g02198 172 CDD IscU_like 30 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Spst9g02198 172 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Spst9g02198 172 Gene3D - 30 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02198 Spst-Chr9 49105656 49106936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02198 K22068 - gmx:100806169 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02198 9 49105656 49106936 Spst9g02198 9 49105656 49106936 ECH
Spst3g04560 3 97275479 97276891 Spst9g02198 9 49105656 49106936 PCT